RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SNIP1Q8TAD8 396 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 LMF2Q9BU23 707 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 NUDT9Q9BW91 350 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 PNO1Q9NRX1 252 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 IL19Q9UHD0 177 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 IKZF2Q9UKS7 526 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 H3BMH7 237 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 NUPR1O60356 82 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 TRAPPC6AO75865 159 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 PFN1P07737 140 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 SLC6A6P31641 620 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 IL24Q13007 206 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 FAM90A2PQ658T7 463 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 UNQ5815/PRO19632Q6UWF5 114 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 OR4C3Q8NH37 302 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 OR1L3Q8NH93 324 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 NUDT22Q9BRQ3 303 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 RTBDNQ9BSG5 229 aaPredicted RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 MAGT1Q9H0U3 335 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 FUT9Q9Y231 359 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 MEMO1Q9Y316 297 aa10.34□□□□□ -0.75
RTN3-203ENST00000341307 LSM5Q9Y4Y9 91 aaKnown RBP10.34□□□□□ -0.75
RTN3-203ENST00000341307 RP1P56715 2156 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 ZNF320A2RRD8 509 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 MMP23AO75900 390 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 IGLV3-21P80748 117 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 TAF9Q16594 264 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 IAH1Q2TAA2 248 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 GLYATL3Q5SZD4 288 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 PRSS57Q6UWY2 283 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 ADGRE4PQ86SQ3 457 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 GATSQ8NAP1 163 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 HOXB13Q92826 284 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 NMNAT3Q96T66 252 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 RXFP3Q9NSD7 469 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 HSPB7Q9UBY9 170 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 IER3IP1Q9Y5U9 82 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 A0A0A6YYH2 397 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 A0A1B0GUS0 222 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 A6NJ64 397 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 NUDT21O43809 227 aaKnown RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 CLPSP04118 112 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 TACSTD2P09758 323 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 TMEM183BQ1AE95 376 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 MPV17LQ2QL34 196 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 ACTL10Q5JWF8 245 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 TMEM108Q6UXF1 575 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 FAM220AQ7Z4H9 259 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 RTN4RL2Q86UN3 420 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 SUMF1Q8NBK3 374 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 OR8G5Q8NG78 346 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 OR2V1Q8NHB1 315 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 KTI12Q96EK9 354 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 ZNF552Q9H707 407 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 CGGBP1Q9UFW8 167 aaPredicted RBP10.33□□□□□ -0.76
RTN3-203ENST00000341307 MED31Q9Y3C7 131 aa10.33□□□□□ -0.76
RTN3-203ENST00000341307 FAM186AA6NE01 2351 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 FAM221AA4D161 298 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 CEACAM18A8MTB9 384 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 GLB1P16278 677 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 CCKBRP32239 447 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 CLDN6P56747 220 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 LCN10Q6JVE6 187 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 SHISA6Q6ZSJ9 500 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TMEM256Q8N2U0 113 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 BCORP1Q8N888 145 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 OR2I1PQ8NGU4 316 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 CLDND2Q8NHS1 167 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 PTPMT1Q8WUK0 201 aaPredicted RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 IL22RA2Q969J5 263 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 FGGYQ96C11 551 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TMEM56Q96MV1 263 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ELL3Q9HB65 397 aaPredicted RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 DNAJB12Q9NXW2 375 aaKnown RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 ST3GAL6Q9Y274 331 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TMEM56-RWDD3S4R434 201 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ARID1BQ8NFD5 2236 aaPredicted RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 H0YIG0 161 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 DUX1O43812 170 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 NGFRP08138 427 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ARR3P36575 388 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 ACAA2P42765 397 aaKnown RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 ERVS71-1P61550 626 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 FUT7Q11130 342 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 PNRC1Q12796 327 aaPredicted RBP10.32□□□□□ -0.76
RTN3-203ENST00000341307 PRDX4Q13162 271 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 MORN2Q502X0 79 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 PMS2CLQ68D20 193 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TGIF2LYQ8IUE0 185 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 SGPP2Q8IWX5 399 aa10.32□□□□□ -0.76
RTN3-203ENST00000341307 TSEN15Q8WW01 171 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms