RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PPA1Q15181 289 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 PRAMEF6Q5VXH4 476 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 GSG1LQ6UXU4 331 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 ZNF573Q86YE8 665 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 Q8NFD4 153 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 OR5AC2Q9NZP5 309 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 IGHV1-18A0A0C4DH31 117 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 IGKV1-6A0A0C4DH72 117 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 CRHP06850 196 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 OR5AC1P0C628 307 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 CBR1P16152 277 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 MRPL49Q13405 166 aaKnown RBP13.14□□□□□ -0.31
MBD1-203ENST00000339998 ELP2Q6IA86 826 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 LRP11Q86VZ4 500 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 VRK1Q99986 396 aaPredicted RBP13.14□□□□□ -0.31
MBD1-203ENST00000339998 RNF126Q9BV68 326 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 OR14J1Q9UGF5 321 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 EDARQ9UNE0 448 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 MAB21L2Q9Y586 359 aa13.14□□□□□ -0.31
MBD1-203ENST00000339998 LEUTXA8MZ59 168 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 RRP8O43159 456 aaKnown RBP13.13□□□□□ -0.31
MBD1-203ENST00000339998 BMP5P22003 454 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 VHLLQ6RSH7 139 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 DHRS11Q6UWP2 260 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 UNQ6126/PRO20091Q6UXV3 157 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 TMEM200AQ86VY9 491 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 MRPL24Q96A35 216 aaKnown RBP13.13□□□□□ -0.31
MBD1-203ENST00000339998 PRRX2Q99811 253 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 MSGN1A6NI15 193 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 RP2O75695 350 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 IFNA7P01567 189 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 HLA-GP17693 338 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 Q6ZR03 302 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 S100PBPQ96BU1 408 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 PCDHB16Q9NRJ7 776 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 TNFSF18Q9UNG2 199 aa13.13□□□□□ -0.31
MBD1-203ENST00000339998 IGKV1D-13A0A0B4J2D9 117 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 IGKV1-13P0DP09 117 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 FAM27E3Q08E93 113 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 RAB32Q13637 225 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 BHLHA15Q7RTS1 189 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 SECTM1Q8WVN6 248 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 RTN4IP1Q8WWV3 396 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 CXorf58Q96LI9 332 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 SLC2A9Q9NRM0 540 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 MBD3L4A6NDZ8 208 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 MBD3L3A6NE82 208 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 MBD3L5A6NJ08 208 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 OR5B21A6NL26 309 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 IFNA2P01563 188 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 RPA2P15927 270 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 S100A10P60903 97 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 RBM39Q14498 530 aaKnown RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 OR8G1Q15617 311 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 TMEM211Q6ICI0 200 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 OR2A2Q6IF42 318 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 DPPA2Q7Z7J5 298 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 MBD3L2Q8NHZ7 208 aaPredicted RBP13.12□□□□□ -0.31
MBD1-203ENST00000339998 IL1F10Q8WWZ1 152 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 Q9N2K0 584 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 DUSP13Q9UII6 198 aa13.12□□□□□ -0.31
MBD1-203ENST00000339998 IGHV2OR16-5A0A0B4J2B6 119 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 TNFSF12O43508 249 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 NAPSAO96009 420 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 PSMB6P28072 239 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 LUMP51884 338 aaPredicted RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 ABCA11PQ4W5N1 156 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 SPRNQ5BIV9 151 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 LPCAT3Q6P1A2 487 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 DCUN1D4Q92564 292 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 SCGB3A2Q96PL1 93 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 RTL8AQ9BWD3 113 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 OPA3Q9H6K4 179 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 RCC2Q9P258 522 aaKnown RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 PPYP01298 95 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 IL24Q13007 206 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 NHLRC3Q5JS37 347 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 PLPPR1Q8TBJ4 325 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 CRYM-AS1A6NIL9 109 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 OR5H1A6NKK0 313 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 A6NLC8 198 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 J3QT63 122 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 M0R1B8 84 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 DEGS1O15121 323 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 TIMM8AO60220 97 aaPredicted RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 RAC2P15153 192 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 CLEC9AQ6UXN8 241 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 SAXO1Q8IYX7 474 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 LHFPL5Q8TAF8 219 aa13.11□□□□□ -0.31
MBD1-203ENST00000339998 MRPL30Q8TCC3 161 aaKnown RBP13.11□□□□□ -0.31
MBD1-203ENST00000339998 GSX2Q9BZM3 304 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms