RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 NMBP08949 121 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 ZNF345Q14585 488 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 COL19A1Q14993 1142 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
RTN4-202ENST00000337526 VSIG4Q9Y279 399 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 PTPRFP10586 1907 aa12.1□□□□□ -0.47
RTN4-202ENST00000337526 IGHV3-43A0A0B4J1X8 118 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 LYZL6O75951 148 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 TTRP02766 147 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 IGHV3-43DP0DP04 118 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
RTN4-202ENST00000337526 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 GAPTQ8N292 157 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 MRGPRDQ8TDS7 321 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 ZNF638Q14966 1978 aaKnown RBP12.09□□□□□ -0.47
RTN4-202ENST00000337526 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 EIF3IQ13347 325 aaKnown RBP12.09□□□□□ -0.47
RTN4-202ENST00000337526 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SPRED2Q7Z698 418 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 A0A1W2PNV4 684 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SLC31A2O15432 143 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 CDS2O95674 445 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 IFITM2Q01629 132 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 BSXQ3C1V8 233 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SPINK14Q6IE38 97 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 CHST5Q9GZS9 411 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 CNOT1A5YKK6 2376 aaKnown RBP12.09□□□□□ -0.47
RTN4-202ENST00000337526 CACNA1EQ15878 2313 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SPINK4O60575 86 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 PAX5Q02548 391 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 ATP6V1FQ16864 119 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 CCL28Q9NRJ3 127 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 KCNK7Q9Y2U2 307 aa12.09□□□□□ -0.47
RTN4-202ENST00000337526 SPTBN2O15020 2390 aa12.08□□□□□ -0.47
RTN4-202ENST00000337526 DXOO77932 396 aaKnown RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 OPN1MWP04001 364 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 ZNF83P51522 516 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 TFF2Q03403 129 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 SPINK9Q5DT21 86 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 SLC36A1Q7Z2H8 476 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 NUFIP2Q7Z417 695 aaKnown RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 BARX1Q9HBU1 254 aaPredicted RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 ERVH48-1M5A8F1 160 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 CCL4P13236 92 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 PMCHP20382 165 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 NCMAPQ5T1S8 102 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 NEIL1Q96FI4 390 aaPredicted RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 PILRAQ9UKJ1 303 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 KLK13Q9UKR3 277 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 AKAP6Q13023 2319 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 CRYBA1P05813 215 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 CST2P09228 141 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 CCL3P10147 92 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 BMP5P22003 454 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 FCER1GP30273 86 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 RANP62826 216 aaKnown RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 VAMP3Q15836 100 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 SLC24A4Q8NFF2 622 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 ZNF721Q8TF20 911 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 FBXO17Q96EF6 278 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 NDFIP1Q9BT67 221 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 VAMP8Q9BV40 100 aa12.08□□□□□ -0.48
RTN4-202ENST00000337526 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
RTN4-202ENST00000337526 MT-CO3P00414 261 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 FAM209AQ5JX71 171 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 MS4A10Q96PG2 267 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 IGHV3-13P01766 116 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 HLA-GP17693 338 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 MPLP40238 635 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 GNG10P50151 68 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 ZNF154Q13106 437 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 MPV17LQ2QL34 196 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 TMEM211Q6ICI0 200 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 OR6S1Q8NH40 331 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 AMELYQ99218 206 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 PRO1933Q9H354 126 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 NDUFB3O43676 98 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 SULT1A1P50225 295 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 PIGYQ3MUY2 71 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 C1QTNF12Q5T7M4 302 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 ATP5SQ99766 215 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms