RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 LMO1P25800 156 aa15.17■□□□□ 0.02
SYNE4-201ENST00000324444 KLF9Q13886 244 aaPredicted RBP15.17■□□□□ 0.02
SYNE4-201ENST00000324444 C12orf4Q9NQ89 552 aa15.17■□□□□ 0.02
SYNE4-201ENST00000324444 COPZ2Q9P299 210 aa15.17■□□□□ 0.02
SYNE4-201ENST00000324444 KCNK7Q9Y2U2 307 aa15.17■□□□□ 0.02
SYNE4-201ENST00000324444 ARFGEF3Q5TH69 2177 aa15.17■□□□□ 0.02
SYNE4-201ENST00000324444 ACANP16112 2415 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 IGHV3-64DA0A0J9YX35 117 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 HAND1O96004 215 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 AKAIN1P0CW23 69 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 SNU13P55769 128 aaKnown RBP15.16■□□□□ 0.02
SYNE4-201ENST00000324444 MEF2DQ14814 521 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 KCNJ8Q15842 424 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 SRSF7Q16629 238 aaKnown RBP eCLIP15.16■□□□□ 0.02
SYNE4-201ENST00000324444 MICBQ29980 383 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 GCSAMQ8N6F7 178 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 ENKURQ8TC29 256 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 NEK7Q8TDX7 302 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 VRK1Q99986 396 aaPredicted RBP15.16■□□□□ 0.02
SYNE4-201ENST00000324444 FAAP24Q9BTP7 215 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 NLKQ9UBE8 527 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 TBC1D24Q9ULP9 559 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 MGAT4AQ9UM21 535 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 WIPI2Q9Y4P8 454 aa15.16■□□□□ 0.02
SYNE4-201ENST00000324444 ZNF736B4DX44 427 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 LANCL1O43813 399 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 OR2H2O95918 312 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 PTHLHP12272 177 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 NAT1P18440 290 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 MRPS11P82912 194 aaKnown RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 GUCA2AQ02747 115 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 OXA1LQ15070 435 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 HFEQ30201 348 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 PAN3Q58A45 887 aaKnown RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 Q6P435 159 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 C20orf204Q6ZNR8 217 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 HOGA1Q86XE5 327 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 BATF2Q8N1L9 274 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 SUMF2Q8NBJ7 301 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 NUDCD2Q8WVJ2 157 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 GCDHQ92947 438 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 MBD6Q96DN6 1003 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 TRAF4Q9BUZ4 470 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 DPCDQ9BVM2 203 aaPredicted RBP15.15■□□□□ 0.02
SYNE4-201ENST00000324444 DLL4Q9NR61 685 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 ANAPC10Q9UM13 185 aa15.15■□□□□ 0.02
SYNE4-201ENST00000324444 TRAV38-1A0A0B4J264 116 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 IGHV1-69-2A0A0G2JMI3 117 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 LINC00854A0A1B0GVQ3 168 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 FAM240BA0A1B0GVZ2 78 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 OR2AT4A6NND4 320 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 PLA2G10O15496 165 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 FSTL3O95633 263 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 DANCRP0C864 163 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 TAS2R46P59540 309 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 DEFB113Q30KQ7 82 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 OLFML2AQ68BL7 652 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 STEAP1BQ6NZ63 245 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 SULT4A1Q9BR01 284 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 C11orf54Q9H0W9 315 aaPredicted RBP15.14■□□□□ 0.01
SYNE4-201ENST00000324444 DNTTIP1Q9H147 329 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 ETAA1Q9NY74 926 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 AK3Q9UIJ7 227 aa15.14■□□□□ 0.01
SYNE4-201ENST00000324444 UBE2QL1A1L167 161 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 NDUFA2O43678 99 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 SSX5O60225 188 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 CD99P14209 185 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 DUSP1P28562 367 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 PRDX2P32119 198 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 ZMYND11Q15326 602 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 RNASE10Q5GAN6 216 aaKnown RBP15.13■□□□□ 0.01
SYNE4-201ENST00000324444 TEX36Q5VZQ5 186 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 C11orf71Q6IPW1 123 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 PEG10Q86TG7 708 aaKnown RBP15.13■□□□□ 0.01
SYNE4-201ENST00000324444 TGIF2LYQ8IUE0 185 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 DPAGT1Q9H3H5 408 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 UBTD1Q9HAC8 227 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 CHMP1AQ9HD42 196 aaPredicted RBP15.13■□□□□ 0.01
SYNE4-201ENST00000324444 HRASLSQ9HDD0 168 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 TMEM106BQ9NUM4 274 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 ZNF701Q9NV72 531 aaPredicted RBP15.13■□□□□ 0.01
SYNE4-201ENST00000324444 OR14J1Q9UGF5 321 aa15.13■□□□□ 0.01
SYNE4-201ENST00000324444 FLNAP21333 2647 aaKnown RBP15.12■□□□□ 0.01
SYNE4-201ENST00000324444 ZNF469Q96JG9 3925 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-201ENST00000324444 PPIAL4EA0A075B759 164 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 TRBV6-6A0A0A6YYG2 114 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 TRAV24A0A0B4J272 114 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 FUOMA2VDF0 154 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 OOEPA6NGQ2 149 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 RFPL4AA6NLU0 287 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 DISC1C4P0D8 188 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 PPIAL4DF5H284 164 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 RFPL4AL1F8VTS6 287 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 TMEM178BH3BS89 294 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 LGALS8O00214 317 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 SLC33A1O00400 549 aaPredicted RBP15.12■□□□□ 0.01
SYNE4-201ENST00000324444 WNT9BO14905 357 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 RAB3DO95716 219 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 CD74P04233 296 aa15.12■□□□□ 0.01
SYNE4-201ENST00000324444 IFNA6P05013 189 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms