RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 OIT3Q8WWZ8 545 aa16.33■□□□□ 0.21
UBXN2A-201ENST00000309033 CCL28Q9NRJ3 127 aa16.33■□□□□ 0.21
UBXN2A-201ENST00000309033 SPAARA0A1B0GVQ0 90 aa16.33■□□□□ 0.21
UBXN2A-201ENST00000309033 ACAA2P42765 397 aaKnown RBP16.33■□□□□ 0.21
UBXN2A-201ENST00000309033 NAT8BQ9UHF3 227 aa16.33■□□□□ 0.21
UBXN2A-201ENST00000309033 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 HSBP1O75506 76 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 LYZP61626 148 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 R3HDM4Q96D70 268 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 IGKV1-8A0A0C4DH67 115 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 LIFP15018 202 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 PRRX1P54821 245 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 INPP5JQ15735 1006 aaPredicted RBP16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 SLC22A18ASQ8N1D0 253 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 ADAT3Q96EY9 351 aaPredicted RBP16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 NOL4LQ96MY1 436 aaPredicted RBP16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 TOLLIPQ9H0E2 274 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 SLC45A2Q9UMX9 530 aa16.33■□□□□ 0.2
UBXN2A-201ENST00000309033 HPXP02790 462 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 FA2HQ7L5A8 372 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 NEIL1Q96FI4 390 aaPredicted RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 IGHV3OR15-7A0A075B7D8 119 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 PTTG1IPP53801 180 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 ETFRF1Q6IPR1 90 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 OR1B1Q8NGR6 318 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 OR6C3Q9NZP0 311 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 KIAA1324LA8MWY0 1029 aaPredicted RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 K7ESF4 209 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 CHST1O43916 411 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 IGF2P01344 180 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 SNRPEP62304 92 aaKnown RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 MRPS11P82912 194 aaKnown RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 OR2M7Q8NG81 312 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 MRPL24Q96A35 216 aaKnown RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 ZNF385AQ96PM9 386 aaKnown RBP16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 FAM162BQ5T6X4 162 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 FKBP11Q9NYL4 201 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 HMSDA8MTL9 139 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 RNF212Q495C1 297 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 TMEM38BQ9NVV0 291 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 NAGKQ9UJ70 344 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 AMDHD2Q9Y303 409 aa16.32■□□□□ 0.2
UBXN2A-201ENST00000309033 CELA2AP08217 269 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 HDHD3Q9BSH5 251 aaPredicted RBP16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 NTMQ9P121 344 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 OOEPA6NGQ2 149 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 HIST1H3AP68431 136 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 SLC25A30Q5SVS4 291 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 DUSP15Q9H1R2 295 aaPredicted RBP16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 ATG2BQ96BY7 2078 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 NPIPB8E9PQR5 432 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 VSIG8P0DPA2 414 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 RHOBP62745 196 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 COL19A1Q14993 1142 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 LINC00052Q96N35 136 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 SIRT4Q9Y6E7 314 aaPredicted RBP16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 CDRT15L2A8MXV6 281 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 PLA2G10O15496 165 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 OR10D4PQ8NGN7 298 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 RNF133Q8WVZ7 376 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 LIPGQ9Y5X9 500 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 A0A1W2PN81 502 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 ACTL6AO96019 429 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 SP1P08047 785 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 KLF9Q13886 244 aaPredicted RBP16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 WDR61Q9GZS3 305 aaKnown RBP16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 PARD6AQ9NPB6 346 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 ST6GALNAC2Q9UJ37 374 aa16.31■□□□□ 0.2
UBXN2A-201ENST00000309033 CD3EP07766 207 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 NANOS3P60323 173 aaKnown RBP16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 ERVS71-1P61550 626 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 ZNF79Q15937 498 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 TOMM20LQ6UXN7 152 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 SEBOXQ9HB31 216 aaPredicted RBP16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 THSD7AQ9UPZ6 1657 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 PRSS53Q2L4Q9 553 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 SLC26A10Q8NG04 563 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 GLRX2Q9NS18 164 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 NUP214P35658 2090 aaPredicted RBP16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 CLDN34H7C241 214 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 SLC25A40Q8TBP6 338 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 PPYP01298 95 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 FAM78BQ5VT40 261 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 TMEM211Q6ICI0 200 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 RGPD4Q7Z3J3 1758 aa16.3■□□□□ 0.2
UBXN2A-201ENST00000309033 SYNGR2O43760 224 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 APELAP0DMC3 54 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 OR4S2Q8NH73 311 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 RSRP1Q9BUV0 290 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 PTP4A3O75365 173 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 FAHD2BQ6P2I3 314 aaPredicted RBP16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 FAHD2AQ96GK7 314 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 ATP5SQ99766 215 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 CRHP06850 196 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 RAB1BQ9H0U4 201 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 AMMECR1Q9Y4X0 333 aaPredicted RBP16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 RBFOX3A6NFN3 312 aa16.29■□□□□ 0.2
UBXN2A-201ENST00000309033 GABRA1P14867 456 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms