RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NAPSAO96009 420 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 CRYAAP02489 173 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 GLAP06280 429 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 PGA5P0DJD9 388 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 GLRXP35754 106 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 FABP6P51161 128 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 ARPC4P59998 168 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 UBE2MP61081 183 aaKnown RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 SURF2Q15527 256 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 MPPED2Q15777 294 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF660Q6AZW8 331 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 Q6ZR03 302 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 NCCRP1Q6ZVX7 275 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 SPERTQ8NA61 448 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 ZFAND1Q8TCF1 268 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 GTF3AQ92664 365 aaKnown RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 SCGB3A2Q96PL1 93 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 VKORC1Q9BQB6 163 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 TLNRD1Q9H1K6 362 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 CXXC4Q9H2H0 198 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 RANBP3Q9H6Z4 567 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF286AQ9HBT8 521 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 DECR2Q9NUI1 292 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 SPEF1Q9Y4P9 236 aa10.08□□□□□ -0.8
TRIM40-205ENST00000307859 C9orf170A2RU37 121 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 OR5H14A6NHG9 310 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C16orf97H3BN30 126 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 NOS1APO75052 506 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-205ENST00000307859 HLA-AP01891 365 aaKnown RBP10.07□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF250P15622 560 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 ECI1P42126 302 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 NPY4RP50391 375 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 RAP2BP61225 183 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 DHODHQ02127 395 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 MSMPQ1L6U9 139 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C12orf45Q8N5I9 185 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-205ENST00000307859 POC1AQ8NBT0 407 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 ADAD2Q8NCV1 583 aaKnown RBP10.07□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM185AQ8NFB2 350 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C5orf66Q9H5L9 145 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 HES4Q9HCC6 221 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 NECAP2Q9NVZ3 263 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 SH3BGRL2Q9UJC5 107 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 FZR1Q9UM11 496 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 PLCE1Q9P212 2302 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 TRAV24A0A0B4J272 114 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 FAM221AA4D161 298 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 MCRIP1C9JLW8 97 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 OR5H8P0DN80 308 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 DUSP1P28562 367 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 IFITM2Q01629 132 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 Q6P435 159 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 SLC22A25Q6T423 547 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 DHRS11Q6UWP2 260 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C22orf34Q6ZV56 151 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 SSX8Q7RTT4 187 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 C11orf53Q8IXP5 236 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 SUMF2Q8NBJ7 301 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 GALNT11Q8NCW6 608 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 MITD1Q8WV92 249 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 ASB13Q8WXK3 278 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 RND1Q92730 232 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM230Q96A57 120 aa10.07□□□□□ -0.8
TRIM40-205ENST00000307859 RTBDNQ9BSG5 229 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-205ENST00000307859 ITPR3Q14573 2671 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 POLEQ07864 2286 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 TRBV6-6A0A0A6YYG2 114 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 F5H5P2 479 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 GOSR2O14653 212 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 CDIPTO14735 213 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 GRPP07492 148 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 CD40P25942 277 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 CD34P28906 385 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 H2BFSP57053 126 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF146Q15072 292 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM128Q5BJH2 165 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 SHEQ5VZ18 495 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 LAMTOR1Q6IAA8 161 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 OR11H4Q8NGC9 324 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 OR2T35Q8NGX2 323 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 TMEM171Q8WVE6 324 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 DHRS9Q9BPW9 319 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 ZNF2Q9BSG1 426 aaPredicted RBP10.06□□□□□ -0.8
TRIM40-205ENST00000307859 RIMS4Q9H426 269 aaPredicted RBP10.06□□□□□ -0.8
TRIM40-205ENST00000307859 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 Q9N2K0 584 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 MEMO1Q9Y316 297 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 BOLA1Q9Y3E2 137 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 POLQO75417 2590 aa10.06□□□□□ -0.8
TRIM40-205ENST00000307859 IGLV3-9A0A075B6K5 115 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 FAM172BPA6NC97 362 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 ATP6V1G2-DDX39BF2Z307 99 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 SLC22A5O76082 557 aa10.05□□□□□ -0.8
TRIM40-205ENST00000307859 DUS4LO95620 317 aaKnown RBP10.05□□□□□ -0.8
TRIM40-205ENST00000307859 PTBP3O95758 552 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms