RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TAF9BQ9HBM6 251 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 SPRR3Q9UBC9 169 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 CEP250Q9BV73 2442 aa18.92■□□□□ 0.62
TPM4-201ENST00000300933 GALR2O43603 387 aaPredicted RBP18.91■□□□□ 0.62
TPM4-201ENST00000300933 CD46P15529 392 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 NQO2P16083 231 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 ZNF600Q6ZNG1 722 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 KIRREL1Q96J84 757 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 FAM86C1Q9NVL1 165 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 PARPBPQ9NWS1 579 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 A0A1W2PR80 420 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 KNG1P01042 644 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 NPBWR2P48146 333 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 RAB1AP62820 205 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 AADACL3Q5VUY0 350 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 CLEC18BQ6UXF7 455 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 TMEM230Q96A57 120 aa18.91■□□□□ 0.62
TPM4-201ENST00000300933 ZNF552Q9H707 407 aaPredicted RBP18.91■□□□□ 0.62
TPM4-201ENST00000300933 hCG_1809904A0A1W2PP81 198 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 A0A1W2PR64 198 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 A0A1W2PRV1 198 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 OR8U9P0C7N5 309 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 CHRFAM7AQ494W8 412 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 PRSS54Q6PEW0 395 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 OR56B2PQ8NGI1 322 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 OR8U1Q8NH10 309 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 SPSB1Q96BD6 273 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 IP6K3Q96PC2 410 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 TM2D1Q9BX74 207 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 CACFD1Q9UGQ2 172 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 DCHS1Q96JQ0 3298 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 FIGNL2A6NMB9 653 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 OR2B8PP59922 312 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 CNN3Q15417 329 aaKnown RBP18.9■□□□□ 0.62
TPM4-201ENST00000300933 TMEM128Q5BJH2 165 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 C5orf24Q7Z6I8 188 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 C10orf35Q96D05 121 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 SAT2Q96F10 170 aaPredicted RBP18.9■□□□□ 0.62
TPM4-201ENST00000300933 PAPOLGQ9BWT3 736 aaKnown RBP18.9■□□□□ 0.62
TPM4-201ENST00000300933 OR51M1Q9H341 326 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 AK3Q9UIJ7 227 aa18.9■□□□□ 0.62
TPM4-201ENST00000300933 A0A1W2PPH5 198 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 CD5P06127 495 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 FCGR3AP08637 254 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 RPUSD3Q6P087 351 aaKnown RBP18.89■□□□□ 0.62
TPM4-201ENST00000300933 SLC5A7Q9GZV3 580 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 GPR132Q9UNW8 380 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 STARD10Q9Y365 291 aa18.89■□□□□ 0.62
TPM4-201ENST00000300933 ANKRD55Q3KP44 614 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 SLC25A26Q70HW3 274 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 GCNT2Q8N0V5 402 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 ZNF561Q8N587 486 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 ZFP62Q8NB50 900 aaPredicted RBP18.89■□□□□ 0.61
TPM4-201ENST00000300933 FDCSPQ8NFU4 85 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 HS3ST6Q96QI5 342 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 RTBDNQ9BSG5 229 aaPredicted RBP18.89■□□□□ 0.61
TPM4-201ENST00000300933 C1QTNF5Q9BXJ0 243 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 ANAPC10Q9UM13 185 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 KMT2EQ8IZD2 1858 aa18.89■□□□□ 0.61
TPM4-201ENST00000300933 HOXB5P09067 269 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 MPZP25189 248 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 HAAOP46952 286 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 VAX1Q5SQQ9 334 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 TMEM42Q69YG0 159 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 Q6ZRG5 221 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 PIP4P1Q86T03 277 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 SEBOXQ9HB31 216 aaPredicted RBP18.88■□□□□ 0.61
TPM4-201ENST00000300933 ST3GAL6Q9Y274 331 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 TNRC6AQ8NDV7 1962 aaKnown RBP18.88■□□□□ 0.61
TPM4-201ENST00000300933 M0R036 132 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 ATMQ13315 3056 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 EMG1Q92979 244 aaKnown RBP18.88■□□□□ 0.61
TPM4-201ENST00000300933 SMIM3Q9BZL3 60 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 EGLN1Q9GZT9 426 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 PLA2G2EQ9NZK7 142 aa18.88■□□□□ 0.61
TPM4-201ENST00000300933 TRGV5A0A0B4J1U4 118 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 CLN5O75503 358 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 TBPP20226 339 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 AWAT1Q58HT5 328 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 ADAM5Q6NVV9 412 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 OR10AD1Q8NGE0 317 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 BCO1Q9HAY6 547 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 SLC7A11Q9UPY5 501 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 DMXL2Q8TDJ6 3036 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 SERPINE3A8MV23 424 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 LILRA1O75019 489 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 TAS2R31P59538 309 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 OR8B8Q15620 311 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 OR2A2Q6IF42 318 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 WDYHV1Q96HA8 205 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 AQP10Q96PS8 301 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 FGF23Q9GZV9 251 aaPredicted RBP18.87■□□□□ 0.61
TPM4-201ENST00000300933 LIME1Q9H400 295 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 ARHGAP21Q5T5U3 1957 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 ZNF816-ZNF321PA0A0X1KG74 233 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 AGAP20933 346 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 S100PP25815 95 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 GPM6AP51674 278 aa18.87■□□□□ 0.61
TPM4-201ENST00000300933 SUPT4H1P63272 117 aaKnown RBP18.87■□□□□ 0.61
TPM4-201ENST00000300933 SPATA46Q5T0L3 261 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms