RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 RPS2P15880 293 aaKnown RBP19.3■□□□□ 0.68
VSTM4-201ENST00000298454 Q6P435 159 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 ZNF826PQ6ZT77 177 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 DPCDQ9BVM2 203 aaPredicted RBP19.3■□□□□ 0.68
VSTM4-201ENST00000298454 CXXC4Q9H2H0 198 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 DEGS1O15121 323 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 RGS11O94810 467 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 CRYAAP02489 173 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 HLA-GP17693 338 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 CCKARP32238 428 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 ECI1P42126 302 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 HOXA4Q00056 320 aaPredicted RBP19.3■□□□□ 0.68
VSTM4-201ENST00000298454 SORDQ00796 357 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 MRGPRGQ86SM5 289 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 LRP11Q86VZ4 500 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 C11orf53Q8IXP5 236 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 Q8IYB0 196 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 C1orf174Q8IYL3 243 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 TOMM40LQ969M1 308 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 FXYD6Q9H0Q3 95 aa19.3■□□□□ 0.68
VSTM4-201ENST00000298454 DBX1A6NMT0 343 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 FAM25EA8MYX2 175 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 NXPH2O95156 264 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 CXCL2P19875 107 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 FXYD4P59646 89 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 PRAMEF6Q5VXH4 476 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 LPCAT3Q6P1A2 487 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 C20orf204Q6ZNR8 217 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 ZGRF1Q86YA3 2104 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 ASB13Q8WXK3 278 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 PDCD10Q9BUL8 212 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 DUSP13Q9UII6 198 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 NFYAP23511 347 aaPredicted RBP19.29■□□□□ 0.68
VSTM4-201ENST00000298454 Q6ZS49 121 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 SLC7A5P1Q8MH63 180 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 RELL2Q8NC24 303 aaPredicted RBP19.29■□□□□ 0.68
VSTM4-201ENST00000298454 ELMOD3Q96FG2 381 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 IFT22Q9H7X7 185 aa19.29■□□□□ 0.68
VSTM4-201ENST00000298454 CTSDP07339 412 aaPredicted RBP19.28■□□□□ 0.68
VSTM4-201ENST00000298454 SCTP09683 121 aa19.28■□□□□ 0.68
VSTM4-201ENST00000298454 ANKRD55Q3KP44 614 aa19.28■□□□□ 0.68
VSTM4-201ENST00000298454 C3orf36Q3SXR2 165 aa19.28■□□□□ 0.68
VSTM4-201ENST00000298454 MRPL30Q8TCC3 161 aaKnown RBP19.28■□□□□ 0.68
VSTM4-201ENST00000298454 CLEC4MQ9H2X3 399 aaPredicted RBP19.28■□□□□ 0.68
VSTM4-201ENST00000298454 HEXA-AS1Q9H8Q6 139 aa19.28■□□□□ 0.68
VSTM4-201ENST00000298454 FXYD6-FXYD2A0A087WZ82 144 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 TRAV14DV4A0A0A6YYC5 116 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 SIRPB1O00241 398 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 OR2H2O95918 312 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 SRSF4Q08170 494 aaKnown RBP19.27■□□□□ 0.68
VSTM4-201ENST00000298454 VHLLQ6RSH7 139 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 GTF3AQ92664 365 aaKnown RBP19.27■□□□□ 0.68
VSTM4-201ENST00000298454 ARPC5O15511 151 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 ZNF728P0DKX0 622 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 RBMXP38159 391 aaKnown RBP19.27■□□□□ 0.68
VSTM4-201ENST00000298454 SEC61A1P61619 476 aaKnown RBP19.27■□□□□ 0.68
VSTM4-201ENST00000298454 SRSF7Q16629 238 aaKnown RBP eCLIP19.27■□□□□ 0.68
VSTM4-201ENST00000298454 POC1AQ8NBT0 407 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 UFSP2Q9NUQ7 469 aa19.27■□□□□ 0.68
VSTM4-201ENST00000298454 A6NLC8 198 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 ATP6V1G2-DDX39BF2Z307 99 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 WNT9BO14905 357 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 SLC34A2O95436 690 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 CD8AP01732 235 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 GLP1RP43220 463 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 NKX6-1P78426 367 aaPredicted RBP19.26■□□□□ 0.67
VSTM4-201ENST00000298454 RBM39Q14498 530 aaKnown RBP19.26■□□□□ 0.67
VSTM4-201ENST00000298454 HEATR1Q9H583 2144 aaKnown RBP19.26■□□□□ 0.67
VSTM4-201ENST00000298454 SLC33A1O00400 549 aaPredicted RBP19.26■□□□□ 0.67
VSTM4-201ENST00000298454 AADACP22760 399 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 SERPINF1P36955 418 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 ZNF146Q15072 292 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 DHRS9Q9BPW9 319 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 SPEF1Q9Y4P9 236 aa19.26■□□□□ 0.67
VSTM4-201ENST00000298454 C13orf42A0A1B0GVH6 325 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 ADAP1O75689 374 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 GLAP06280 429 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 ZNF250P15622 560 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 GLRXP35754 106 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 HERPUD1Q15011 391 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 LRRC37A5PQ49AS3 106 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 PAN3Q58A45 887 aaKnown RBP19.25■□□□□ 0.67
VSTM4-201ENST00000298454 SPERTQ8NA61 448 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 OR2Z1Q8NG97 314 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 OR5T2Q8NGG2 359 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 COQ8AQ8NI60 647 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 MOB3AQ96BX8 217 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 TLNRD1Q9H1K6 362 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 HES4Q9HCC6 221 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 TUBD1Q9UJT1 453 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 ATP23Q9Y6H3 246 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 A0A1B0GWJ7 208 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 C5orf51A6NDU8 294 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 RFPL4AA6NLU0 287 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 TRDCB7Z8K6 153 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 RFPL4AL1F8VTS6 287 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 BET1O15155 118 aa19.25■□□□□ 0.67
VSTM4-201ENST00000298454 ACAA1P09110 424 aaPredicted RBP19.25■□□□□ 0.67
VSTM4-201ENST00000298454 RCC1P18754 421 aaPredicted RBP19.25■□□□□ 0.67
VSTM4-201ENST00000298454 CEBPDP49716 269 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms