RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF793Q6ZN11 406 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR2T10Q8NGZ9 312 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF275Q9NSD4 429 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 CDRT15L2A8MXV6 281 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 RPL13AP40429 203 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 FAM3AP98173 230 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 IFITM3Q01628 133 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 FFAR4Q5NUL3 377 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 APOBEC3DQ96AK3 386 aaPredicted RBP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 DNAJB12Q9NXW2 375 aaKnown RBP10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF835Q9Y2P0 537 aa10.46□□□□□ -0.73
SYNGAP1-201ENST00000293748 CTSDP07339 412 aaPredicted RBP10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 HES1Q14469 280 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ATP6V1FQ16864 119 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 NCMAPQ5T1S8 102 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 Q8IYB0 196 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ANKRD10Q9NXR5 420 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 PILRAQ9UKJ1 303 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 MRPS2Q9Y399 296 aaKnown RBP10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAM24AA6NFZ4 105 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 MFNGO00587 321 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 FCN1O00602 326 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 TCAPO15273 167 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ADAM20O43506 726 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 SPRY1O43609 319 aaPredicted RBP10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF737O75373 536 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 CRYBA1P05813 215 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZIC1Q15915 447 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 C9orf152Q5JTZ5 239 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR2Y1Q8NGV0 311 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 NPAS1Q99742 590 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ASCL3Q9NQ33 180 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 NAT8Q9UHE5 227 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 TCFL5Q9UL49 500 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZMIZ1Q9ULJ6 1067 aa10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 LSM2Q9Y333 95 aaKnown RBP10.46□□□□□ -0.74
SYNGAP1-201ENST00000293748 GATCO43716 136 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 DHRS3O75911 302 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 MBPP02686 304 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 FAM219BQ5XKK7 198 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR1F12Q8NHA8 337 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 OIT3Q8WWZ8 545 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 RSRP1Q9BUV0 290 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 PMS2P1A4D2B8 440 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 PDCD6O75340 191 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 ARG1P05089 322 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 SPCS3P61009 180 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 KLF9Q13886 244 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 SMIM21Q3B7S5 101 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 TRILQ7L0X0 811 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 BMPERQ8N8U9 685 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 CPEB3Q8NE35 698 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR4C3Q8NH37 302 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 MRPS24Q96EL2 167 aaKnown RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 SLC45A2Q9UMX9 530 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 GPR37O15354 613 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 ADAP1O75689 374 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 KRASP01116 189 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 SEMG1P04279 462 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 B4GALT1P15291 398 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 P2RY1P47900 373 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF345Q14585 488 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 POM121L2Q96KW2 1035 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 PACRGQ96M98 296 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM131Q92545 1883 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 TMEM30CPA0ZSE6 113 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDC42EP2O14613 210 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 LIFP15018 202 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF770Q6IQ21 691 aaPredicted RBP10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZG16BQ96DA0 208 aa10.45□□□□□ -0.74
SYNGAP1-201ENST00000293748 KIAA1324LA8MWY0 1029 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 NPIPB8E9PQR5 432 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZGLP1P0C6A0 271 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDKN2AP42771 156 aaKnown RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 AMTP48728 403 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 SULT1A1P50225 295 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 SLC25A42Q86VD7 318 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10A7Q8NGE5 316 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 BARX1Q9HBU1 254 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 CDC14BO60729 498 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 CBR3O75828 277 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 YIF1AO95070 293 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 GPM6AP51674 278 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 GNG3P63215 75 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF816Q0VGE8 651 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 TUSC1Q2TAM9 212 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ZNF718Q3SXZ3 478 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 Q3ZCU0 254 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 OR10X1Q8NGY0 326 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 KLF13Q9Y2Y9 288 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 GOLT1BQ9Y3E0 138 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 ST8SIA5O15466 376 aa10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 PRKNO60260 465 aaPredicted RBP10.44□□□□□ -0.74
SYNGAP1-201ENST00000293748 WISP3O95389 354 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms