RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TBC1D26Q86UD7 250 aa14.58□□□□□ -0.08
RTN1-201ENST00000267484 OR5C1Q8NGR4 320 aa14.58□□□□□ -0.08
RTN1-201ENST00000267484 C10orf35Q96D05 121 aa14.58□□□□□ -0.08
RTN1-201ENST00000267484 STRAPQ9Y3F4 350 aaKnown RBP14.58□□□□□ -0.08
RTN1-201ENST00000267484 U3KQA8 63 aa14.58□□□□□ -0.08
RTN1-201ENST00000267484 AP4M1O00189 453 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 PDCD6O75340 191 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 TMEM50AO95807 157 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 NKX2-1P43699 371 aaPredicted RBP14.57□□□□□ -0.08
RTN1-201ENST00000267484 RGS19P49795 217 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 RND3P61587 244 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 C9orf135Q5VTT2 229 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 CDPF1Q6NVV7 123 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 SPSB3Q6PJ21 355 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 CRIM1Q9NZV1 1036 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 MUC3AQ02505 3323 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 PROB1E7EW31 1015 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 CCNOP22674 350 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 DSCR4P56555 118 aaPredicted RBP14.57□□□□□ -0.08
RTN1-201ENST00000267484 RHEBQ15382 184 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 LHFPL2Q6ZUX7 228 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 ZNF611Q8N823 705 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 DOCK7Q96N67 2140 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 MAP1BP46821 2468 aaKnown RBP14.57□□□□□ -0.08
RTN1-201ENST00000267484 RBFOX3A6NFN3 312 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 H3BP45 60 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 VAMP5O95183 116 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 UMODP07911 640 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 SCTP09683 121 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 CCL2P13500 99 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 CEACAM16Q2WEN9 425 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 ZNF695Q8IW36 515 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 RAB39BQ96DA2 213 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 TMEM38BQ9NVV0 291 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 PARPBPQ9NWS1 579 aa14.57□□□□□ -0.08
RTN1-201ENST00000267484 H3BQ15 152 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 HSD17B6O14756 317 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 DYNLT3P51808 116 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 ZNF818PQ6ZRF7 136 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 DNASE2BQ8WZ79 361 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TMED3Q9Y3Q3 217 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 IGKV1D-13A0A0B4J2D9 117 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 CXCL13O43927 109 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 IGKV1-13P0DP09 117 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 EIF2S3P41091 472 aaKnown RBP14.56□□□□□ -0.08
RTN1-201ENST00000267484 RBM11P57052 281 aaKnown RBP14.56□□□□□ -0.08
RTN1-201ENST00000267484 KIAA0141Q14154 515 aaPredicted RBP14.56□□□□□ -0.08
RTN1-201ENST00000267484 IZUMO4Q1ZYL8 232 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 ODF3L1Q8IXM7 274 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TMEM252Q8N6L7 170 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 OR14L1PQ8NHC6 308 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TCTEX1D2Q8WW35 142 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 IGHV1-45A0A0A0MS14 117 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TRDCB7Z8K6 153 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 PPIHO43447 177 aaKnown RBP14.56□□□□□ -0.08
RTN1-201ENST00000267484 RAB5CP51148 216 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 ZNF154Q13106 437 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TSC22D1Q15714 1073 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 GAPTQ8N292 157 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 GPR137CQ8N3F9 429 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 CYB561D1Q8N8Q1 229 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 PAPOLGQ9BWT3 736 aaKnown RBP14.56□□□□□ -0.08
RTN1-201ENST00000267484 TMEM222Q9H0R3 208 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 WNT5BQ9H1J7 359 aa14.56□□□□□ -0.08
RTN1-201ENST00000267484 TOX3O15405 576 aaPredicted RBP14.55□□□□□ -0.08
RTN1-201ENST00000267484 CXCL1P09341 107 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 TAGLN2P37802 199 aaKnown RBP14.55□□□□□ -0.08
RTN1-201ENST00000267484 HEPN1Q6WQI6 88 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 CCDC71LQ8N9Z2 235 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 hCG_38984A0A1B0GV85 526 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 RFPL3SP0C7P2 107 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 EDN3P14138 238 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 NDUFA6P56556 154 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 ASCL4Q6XD76 172 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 AAED1Q7RTV5 226 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 OR51M1Q9H341 326 aa14.55□□□□□ -0.08
RTN1-201ENST00000267484 A0A087WZY1 265 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 FUT3P21217 361 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 SSR4P51571 173 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 PDZD11Q5EBL8 140 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 EXTL1Q92935 676 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 C11orf1Q9H5F2 150 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 IFITM10A6NMD0 228 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 COX6A1P12074 109 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 CCL4P13236 92 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 BCL3P20749 454 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 FKBP2P26885 142 aaKnown RBP14.54□□□□□ -0.08
RTN1-201ENST00000267484 RAC1P63000 192 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 TMEM42Q69YG0 159 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 DPPA2Q7Z7J5 298 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 SELENOHQ8IZQ5 122 aaKnown RBP14.54□□□□□ -0.08
RTN1-201ENST00000267484 MUCL1Q96DR8 90 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 FOXB1Q99853 325 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 OR2H1Q9GZK4 316 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 ZMAT5Q9UDW3 170 aaKnown RBP14.54□□□□□ -0.08
RTN1-201ENST00000267484 HS3ST3B1Q9Y662 390 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 DIDO1Q9BTC0 2240 aaKnown RBP14.54□□□□□ -0.08
RTN1-201ENST00000267484 OR6C6A6NF89 314 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 UBE2KP61086 200 aa14.54□□□□□ -0.08
RTN1-201ENST00000267484 VAMP2P63027 116 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms