RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 POM121Q96HA1 1249 aa13.78□□□□□ -0.2
LMNB1-201ENST00000261366 MRGPRX4Q96LA9 322 aa13.78□□□□□ -0.2
LMNB1-201ENST00000261366 FOXD3Q9UJU5 478 aaPredicted RBP13.78□□□□□ -0.2
LMNB1-201ENST00000261366 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
LMNB1-201ENST00000261366 IGKV1-12A0A0C4DH73 117 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 IGKV1D-12P01611 117 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 FUT3P21217 361 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 DDTP30046 118 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 GNRHRP30968 328 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 CCR5P51681 352 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 ENDOGQ14249 297 aaKnown RBP13.77□□□□□ -0.2
LMNB1-201ENST00000261366 Q6ZPA2 131 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 D2HGDHQ8N465 521 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 MVB12AQ96EY5 273 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 FAM210BQ96KR6 192 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 ARHGAP21Q5T5U3 1957 aa13.77□□□□□ -0.2
LMNB1-201ENST00000261366 TLX3O43711 291 aaPredicted RBP13.77□□□□□ -0.21
LMNB1-201ENST00000261366 LMO1P25800 156 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 ARL6IP1Q15041 203 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 THNSL2Q86YJ6 484 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 TSTD1Q8NFU3 115 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 OR4D5Q8NGN0 318 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 CPNE4Q96A23 557 aaPredicted RBP13.77□□□□□ -0.21
LMNB1-201ENST00000261366 PACRGQ96M98 296 aaPredicted RBP13.77□□□□□ -0.21
LMNB1-201ENST00000261366 V9GYS6 101 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 HSPA12AO43301 675 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 CD38P28907 300 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 UNKLQ9H9P5 680 aaKnown RBP13.77□□□□□ -0.21
LMNB1-201ENST00000261366 CALHM2Q9HA72 323 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF286AQ9HBT8 521 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 EML6Q6ZMW3 1958 aa13.77□□□□□ -0.21
LMNB1-201ENST00000261366 IGHV1OR21-1A0A087WYE8 117 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 BTBD17A6NE02 478 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 TERTO14746 1132 aaKnown RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 TIAF1O95411 115 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 ALDH3B1P43353 468 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 RPS18P62269 152 aaKnown RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 TBC1D26Q86UD7 250 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 MYPOPQ86VE0 399 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 KIAA1456Q9P272 454 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 A0A087WZY1 265 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 MPPED1O15442 326 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 PPYP01298 95 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 SNRPCP09234 159 aaKnown RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 CD200P41217 278 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 TMEM267Q0VDI3 215 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 WDR25Q64LD2 544 aaPredicted RBP13.76□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF774Q6NX45 483 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 SLC7A10Q9NS82 523 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
LMNB1-201ENST00000261366 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 CHST1O43916 411 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 MAS1LP35410 378 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 GLIPR1P48060 266 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 DPPA2Q7Z7J5 298 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 PIGCQ92535 297 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 GTF3AQ92664 365 aaKnown RBP13.75□□□□□ -0.21
LMNB1-201ENST00000261366 RSG1Q9BU20 258 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF665Q9H7R5 613 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 TMED3Q9Y3Q3 217 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF705GA8MUZ8 300 aaPredicted RBP13.75□□□□□ -0.21
LMNB1-201ENST00000261366 C10orf142B7Z368 130 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 NPIPA2E9PIF3 369 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 NPIPA3F8WFD2 350 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 TSTD3H0UI37 97 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 HLA-DRB3P79483 266 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 RTL6Q6ICC9 239 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 SYT13Q7L8C5 426 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 PLEKHF2Q9H8W4 249 aa13.75□□□□□ -0.21
LMNB1-201ENST00000261366 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 MRPS34P82930 218 aaKnown RBP13.74□□□□□ -0.21
LMNB1-201ENST00000261366 HIST2H3PS2Q5TEC6 136 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 RAET1LQ5VY80 246 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
LMNB1-201ENST00000261366 CLDND2Q8NHS1 167 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 CA5BP1Q8WTZ4 195 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 MISP3Q96FF7 219 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 ULBP2Q9BZM5 246 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 DMDP11532 3685 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 A0A0U1RQV5 110 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 A0A1W2PR80 420 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 CD55P08174 381 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 CELA2AP08217 269 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 FOSL1P15407 271 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 PTGDSP41222 190 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 NPBWR2P48146 333 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 SHBQ15464 509 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 OSR2Q8N2R0 312 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 CCDC71LQ8N9Z2 235 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 MOB3AQ96BX8 217 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 VSIRQ9H7M9 311 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 GPR27Q9NS67 375 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 LRFN1Q9P244 771 aa13.74□□□□□ -0.21
LMNB1-201ENST00000261366 IGHV1OR15-9A0A0B4J2B8 117 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 SMCO3A2RU48 225 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 AQP7P3A6NL99 342 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 TRDCB7Z8K6 153 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 PITX3O75364 302 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms