RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 PLEKHF2Q9H8W4 249 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 RNF114Q9Y508 228 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 PROB1E7EW31 1015 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 RENP00797 406 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 OMGP23515 440 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 TAS2R30P59541 319 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 WDR73Q6P4I2 378 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
MSH2-201ENST00000233146 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 TSPAN32Q96QS1 320 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 ALPK2Q86TB3 2170 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 C22orf46C9J442 243 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 MPZL1O95297 269 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 NTHL1P78549 312 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 MRGPRGQ86SM5 289 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 NIT1Q86X76 327 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 ARHGEF39Q8N4T4 335 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 PATZ1Q9HBE1 687 aaKnown RBP11.32□□□□□ -0.6
MSH2-201ENST00000233146 G6PC2Q9NQR9 355 aa11.32□□□□□ -0.6
MSH2-201ENST00000233146 MPDZO75970 2070 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 GRIFINA4D1Z8 144 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 ADMP35318 185 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 GRK6P43250 576 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 LGALS7P47929 136 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 DYNLT3P51808 116 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 RBPJQ06330 500 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 CD226Q15762 336 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 KCTD18Q6PI47 426 aaPredicted RBP11.31□□□□□ -0.6
MSH2-201ENST00000233146 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 TMEM252Q8N6L7 170 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 CDRT4Q8N9R6 151 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 OR52R1Q8NGF1 315 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 ZNF596Q8TC21 504 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 DOK4Q8TEW6 326 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 LINC00615Q96LM1 132 aaPredicted RBP11.31□□□□□ -0.6
MSH2-201ENST00000233146 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 GPR34Q9UPC5 381 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 EMC9Q9Y3B6 208 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 R4GMQ9 66 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 IGKV1D-42A0A075B6H8 117 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 A0A1W2PNV4 684 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 GDF9O60383 454 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 SERF1AO75920 110 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 MPIG6BO95866 241 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 SMAD3P84022 425 aaKnown RBP11.31□□□□□ -0.6
MSH2-201ENST00000233146 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 LIPHQ8WWY8 451 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 NAA60Q9H7X0 242 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 HS3ST2Q9Y278 367 aa11.31□□□□□ -0.6
MSH2-201ENST00000233146 SLC11A1P49279 550 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 PIGPP57054 158 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 PNKDQ8N490 385 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 CPT1CQ8TCG5 803 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 BTF3L4Q96K17 158 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 C1orf147Q96MC9 270 aaPredicted RBP11.3□□□□□ -0.6
MSH2-201ENST00000233146 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 CEBPBP17676 345 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 GABRA3P34903 492 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 FFAR4Q5NUL3 377 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.3□□□□□ -0.6
MSH2-201ENST00000233146 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 PSMF1Q92530 271 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 HLA-DQA2P01906 255 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 SERPINA7P05543 415 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 C8AP07357 584 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 CD52P31358 61 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 LCN15Q6UWW0 184 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 OR5B3Q8NH48 314 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 PARLQ9H300 379 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
MSH2-201ENST00000233146 ATG2AQ2TAZ0 1938 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 GAGE12BA1L429 117 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 ZNF891A8MT65 544 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 TNFRSF10CO14798 259 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 CST5P28325 142 aaPredicted RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 PRDX1Q06830 199 aaKnown RBP11.29□□□□□ -0.6
MSH2-201ENST00000233146 ZNF74Q16587 644 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 RNF144BQ7Z419 303 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 TMEM217Q8N7C4 229 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 SLC38A9Q8NBW4 561 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 OR52L2PQ8NGH6 319 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 PLPPR1Q8TBJ4 325 aa11.29□□□□□ -0.6
MSH2-201ENST00000233146 MSI2Q96DH6 328 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms