RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 AESQ08117 197 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 GALEQ14376 348 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 CDK5R1Q15078 307 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 ELP2Q6IA86 826 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 BAIAP2L2Q6UXY1 529 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 RNF144BQ7Z419 303 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 TRAPPC6BQ86SZ2 158 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 SYS1Q8N2H4 156 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 Q8NFD4 153 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 COQ2Q96H96 371 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 RBM14Q96PK6 669 aaKnown RBP12.68□□□□□ -0.38
ERCC1-201ENST00000013807 MYRFQ9Y2G1 1151 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 PCDHGB5Q9Y5G0 923 aa12.68□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A18PA6NE21 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A16PA6NEW6 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A20PA6NIJ5 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF729A6NN14 1252 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A9PA6NNJ1 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A12PA8MX19 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A5PA8MXJ8 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 SLC33A1O00400 549 aaPredicted RBP12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A15PP0C7V4 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A13PP0C7W8 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A14PP0C7W9 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 FAM90A24PP0C7X0 464 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 CALCBP10092 127 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 DBTP11182 482 aaKnown RBP12.67□□□□□ -0.38
ERCC1-201ENST00000013807 GDNFP39905 211 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 CEACAM3P40198 252 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 ARHGDIBP52566 201 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 MRPL28Q13084 256 aaKnown RBP12.67□□□□□ -0.38
ERCC1-201ENST00000013807 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF529Q6P280 563 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 OR51T1Q8NGJ9 327 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 OR13C9Q8NGT0 318 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 LGALS12Q96DT0 336 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 MRPL48Q96GC5 212 aaKnown RBP12.67□□□□□ -0.38
ERCC1-201ENST00000013807 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 OR5M11Q96RB7 305 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 OR6C3Q9NZP0 311 aa12.67□□□□□ -0.38
ERCC1-201ENST00000013807 J3QLW9 94 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 M0QZK8 103 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 EI24O14681 340 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PIN1P1O15428 100 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PRB2P02812 416 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF19P17023 458 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PTGFRP43088 359 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 MTNR1BP49286 362 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PRRX1P54821 245 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 LOXL3P58215 753 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 KPNB1Q14974 876 aaKnown RBP12.66□□□□□ -0.38
ERCC1-201ENST00000013807 KISS1Q15726 138 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-201ENST00000013807 CCDC144NLQ6NUI1 221 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PXT1Q8NFP0 134 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 OR4D6Q8NGJ1 314 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 OR13C3Q8NGS6 347 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 HAVCR2Q8TDQ0 301 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 PYDC1Q8WXC3 89 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 STMN2Q93045 179 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 SLC25A33Q9BSK2 321 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 INPP5EQ9NRR6 644 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 MRPS18AQ9NVS2 196 aaKnown RBP12.66□□□□□ -0.38
ERCC1-201ENST00000013807 ORC6Q9Y5N6 252 aa12.66□□□□□ -0.38
ERCC1-201ENST00000013807 TSSC4Q9Y5U2 329 aaPredicted RBP12.66□□□□□ -0.38
ERCC1-201ENST00000013807 KBTBD11-OT1A0A1B0GTJ5 212 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 TMEM212A6NML5 194 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 H3BNX3 289 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 DEGS1O15121 323 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 SULT1B1O43704 296 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 CIB2O75838 187 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 ZFPL1O95159 310 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 OCM2P0CE71 109 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 OCMP0CE72 109 aaPredicted RBP12.65□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF44P15621 663 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 SNU13P55769 128 aaKnown RBP12.65□□□□□ -0.38
ERCC1-201ENST00000013807 KRBOX4Q5JUW0 171 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 TPTE2P1Q5T6R2 138 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 ASCL4Q6XD76 172 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 CENPVQ7Z7K6 275 aaPredicted RBP12.65□□□□□ -0.38
ERCC1-201ENST00000013807 ZNF565Q8N9K5 539 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 RHOXF1Q8NHV9 184 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 KIRREL1Q96J84 757 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
ERCC1-201ENST00000013807 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
ERCC1-201ENST00000013807 TOR1AO14656 332 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 MPZL2O60487 215 aa12.64□□□□□ -0.39
ERCC1-201ENST00000013807 FADS2O95864 444 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms