RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PTHLHP12272 177 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 HOXB3P14651 431 aaPredicted RBP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 HTRA4P83105 476 aaPredicted RBP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 INSL4Q14641 139 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 RHBDD2Q6NTF9 364 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 GABRG3Q99928 467 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 WDR13Q9H1Z4 485 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 IGHV5-10-1A0A0J9YXX1 117 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 TMEM127O75204 238 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 CXorf51AA0A1B0GTR3 108 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 TIAL1Q01085 375 aaKnown RBP eCLIP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 OR8B12Q8NGG6 310 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 A0A1B0GTH9 108 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 SPAARA0A1B0GVQ0 90 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 PLPP2O43688 288 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 EML2O95834 649 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 SFTA3P0C7M3 94 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 DRD3P35462 400 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ZG16BQ96DA0 208 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 MSL2Q9HCI7 577 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 SIRT3Q9NTG7 399 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-211ENST00000629427 FER1L5A0AVI2 2057 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 IGHV3OR15-7A0A075B7D8 119 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 PDCD6O75340 191 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 BCL3P20749 454 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 HOXC8P31273 242 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 FGF8P55075 233 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-211ENST00000629427 C21orf58P58505 322 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ETFDHQ16134 617 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 MED30Q96HR3 178 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 RNF2Q99496 336 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 KIAA1324LA8MWY0 1029 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ORM1P02763 201 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ARG1P05089 322 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 SPCS3P61009 180 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 HIST1H3AP68431 136 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 FAM219BQ5XKK7 198 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 C5orf17Q8NAS9 161 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 RASL10BQ96S79 203 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 PARD6AQ9NPB6 346 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 C21orf140B9A014 251 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ID4P47928 161 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF154Q13106 437 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 LINC00299Q6ZSB3 139 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 MOGAT1Q96PD6 335 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF275Q9NSD4 429 aaPredicted RBP10.4□□□□□ -0.74
SHPRH-211ENST00000629427 C1RLQ9NZP8 487 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 WASHC3Q9Y3C0 194 aa10.4□□□□□ -0.74
SHPRH-211ENST00000629427 AREGP15514 252 aa10.4□□□□□ -0.75
SHPRH-211ENST00000629427 RPEL1Q2QD12 228 aa10.4□□□□□ -0.75
SHPRH-211ENST00000629427 OR2Y1Q8NGV0 311 aa10.4□□□□□ -0.75
SHPRH-211ENST00000629427 OR6X1Q8NH79 312 aa10.4□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF707Q96C28 371 aaPredicted RBP10.4□□□□□ -0.75
SHPRH-211ENST00000629427 SLC7A10Q9NS82 523 aa10.4□□□□□ -0.75
SHPRH-211ENST00000629427 MED19A0JLT2 244 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZFPL1O95159 310 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CD40P25942 277 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF141Q15928 474 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 MOGAT2Q3SYC2 334 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 C12orf73Q69YU5 71 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF66Q6ZN08 573 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF561Q8N587 486 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 PTP4A1Q93096 173 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF768Q9H5H4 540 aaKnown RBP10.39□□□□□ -0.75
SHPRH-211ENST00000629427 NAA60Q9H7X0 242 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 SLC17A5Q9NRA2 495 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 AUP1Q9Y679 476 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 HAND1O96004 215 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 PNPP00491 289 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 SBK3P0C264 359 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 G6PCP35575 357 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CD96P40200 585 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 DYNLT3P51808 116 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 LILRA6Q6PI73 481 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CARFQ8N187 725 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ZNF680Q8NEM1 530 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 TMEM37Q8WXS4 190 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ASCL3Q9NQ33 180 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 C9orf172C9J069 976 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CAMPP49913 170 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 GUK1Q16774 197 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 ABHD3Q8WU67 409 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 PCGF1Q9BSM1 259 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 DLEC1Q9Y238 1755 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 TRDCB7Z8K6 153 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 GP1BAP07359 652 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 NPY1RP25929 384 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 GLDNQ6ZMI3 551 aaPredicted RBP10.39□□□□□ -0.75
SHPRH-211ENST00000629427 VSTM2LQ96N03 204 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 IGLV3-16A0A075B6K0 115 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 RPS4XP62701 263 aaKnown RBP10.39□□□□□ -0.75
SHPRH-211ENST00000629427 MRPS11P82912 194 aaKnown RBP10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CBLN3Q6UW01 205 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 LAMB2P55268 1798 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 CTLA4P16410 223 aa10.39□□□□□ -0.75
SHPRH-211ENST00000629427 NAAAQ02083 359 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms