RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ANXA10Q9UJ72 324 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 STARD10Q9Y365 291 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 K7ESF4 209 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-209ENST00000627620 BCL3P20749 454 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 TIPARPQ7Z3E1 657 aaKnown RBP11.29□□□□□ -0.6
SCN8A-209ENST00000627620 OR10G4Q8NGN3 311 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 OR10G9Q8NGN4 311 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 OR10G7Q8NGN6 311 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 GRAMD2BQ96HH9 432 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 NEURL2Q9BR09 285 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CLEC5AQ9NY25 188 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CDIPTO14735 213 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
SCN8A-209ENST00000627620 SPINK4O60575 86 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 NQO2P16083 231 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 ZP3P21754 424 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 COL19A1Q14993 1142 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 TBC1D26Q86UD7 250 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CLRN3Q8NCR9 226 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 ADTRPQ96IZ2 230 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-209ENST00000627620 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 PCOLCE2Q9UKZ9 415 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 SOCS1O15524 211 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 INHBBP09529 407 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 FABP4P15090 132 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 GALR1P47211 349 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CLPPQ16740 277 aaPredicted RBP11.29□□□□□ -0.6
SCN8A-209ENST00000627620 ABHD3Q8WU67 409 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 TINAGQ9UJW2 476 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 SCN1AP35498 2009 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 HAND1O96004 215 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 PNLIPP16233 465 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 ZNF66Q6ZN08 573 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 MOGAT3Q86VF5 341 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 TMEM37Q8WXS4 190 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 MARVELD1Q9BSK0 173 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 OR2H1Q9GZK4 316 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 NAT8BQ9UHF3 227 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CCL27Q9Y4X3 112 aa11.29□□□□□ -0.6
SCN8A-209ENST00000627620 CDX4O14627 284 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-209ENST00000627620 PRSS23O95084 383 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 ORM2P19652 201 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCN8A-209ENST00000627620 RNF212Q495C1 297 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 KLHDC1Q8N7A1 406 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 ADAP1O75689 374 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 SP1P08047 785 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 SLC6A1P30531 599 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 AMTP48728 403 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 LYZP61626 148 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 ATP6V1FQ16864 119 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 POMT1Q9Y6A1 747 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 TSPO2Q5TGU0 170 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 C10orf35Q96D05 121 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 R3HDM4Q96D70 268 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 SPAARA0A1B0GVQ0 90 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 F5H697 171 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-209ENST00000627620 GAMTQ14353 236 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 MOGAT2Q3SYC2 334 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 OR8B3Q8NGG8 313 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 OR8B2Q96RD0 313 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 SH2D2AQ9NP31 389 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 NEU3Q9UQ49 428 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 ZNF205O95201 554 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 CD200P41217 278 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 FGF8P55075 233 aaPredicted RBP11.28□□□□□ -0.6
SCN8A-209ENST00000627620 TMEM65Q6PI78 240 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 CLEC9AQ6UXN8 241 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 VSTM2AQ8TAG5 236 aa11.28□□□□□ -0.6
SCN8A-209ENST00000627620 CLDN34H7C241 214 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 BGLAPP02818 100 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 Q1RN00 199 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 PRR7Q8TB68 274 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 SAP30LQ9HAJ7 183 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 PRR13Q9NZ81 148 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 NTMQ9P121 344 aa11.27□□□□□ -0.6
SCN8A-209ENST00000627620 PHOX2AO14813 284 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 TMEM33P57088 247 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 HIKESHIQ53FT3 197 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
SCN8A-209ENST00000627620 C9orf40Q8IXQ3 194 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 OR2M3Q8NG83 312 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 RPS4Y2Q8TD47 263 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 TO15178 435 aa11.27□□□□□ -0.61
SCN8A-209ENST00000627620 RTP5Q14D33 572 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms