RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 DYNLT3P51808 116 aa16.51■□□□□ 0.23
GABPB1-212ENST00000615671 TRAT1Q6PIZ9 186 aa16.51■□□□□ 0.23
GABPB1-212ENST00000615671 GPR27Q9NS67 375 aa16.51■□□□□ 0.23
GABPB1-212ENST00000615671 TMSB15BA0A087X1C1 80 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 UBE2L3P68036 154 aaKnown RBP16.5■□□□□ 0.23
GABPB1-212ENST00000615671 PRDM14Q9GZV8 571 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 RASL12Q9NYN1 266 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 RNF7Q9UBF6 113 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 RNF24Q9Y225 148 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 OR10G4Q8NGN3 311 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 OR10G9Q8NGN4 311 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 OR10G7Q8NGN6 311 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 TMEM18Q96B42 140 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 GSX2Q9BZM3 304 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 SLC7A10Q9NS82 523 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 LAMB1P07942 1786 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 S100A8P05109 93 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 PSMB2P49721 201 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 CD226Q15762 336 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF547Q8IVP9 402 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 ADAMTS17Q8TE56 1095 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 SLC45A2Q9UMX9 530 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 KCNJ3P48549 501 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 HNRNPA3P51991 378 aaKnown RBP16.5■□□□□ 0.23
GABPB1-212ENST00000615671 WDR13Q9H1Z4 485 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 CACFD1Q9UGQ2 172 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 ZFPL1O95159 310 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 MMP15P51511 669 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 MOB1BQ7L9L4 216 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 PAPPA2Q9BXP8 1791 aa16.5■□□□□ 0.23
GABPB1-212ENST00000615671 PNPP00491 289 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ERVS71-1P61550 626 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 RAB32Q13637 225 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 STPG1Q5TH74 334 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 GGNBP1Q5YKI7 109 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 TCTE3Q8IZS6 198 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF764Q96H86 408 aaPredicted RBP16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ASPDHA6ND91 283 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 CGB1A6NKQ9 187 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 PMELP40967 661 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 SLC25A1P53007 311 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 AESQ08117 197 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 TEX50A0A1B0GTY4 177 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 WNT5AP41221 380 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 FAM162BQ5T6X4 162 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 FDX2Q6P4F2 183 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 VN1R4Q7Z5H5 301 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 SRD5A3Q9H8P0 318 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 MBD1Q9UIS9 605 aaPredicted RBP16.49■□□□□ 0.23
GABPB1-212ENST00000615671 IGHV3OR16-10A0A075B7F0 116 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 C16orf97H3BN30 126 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 DUSP18Q8NEJ0 188 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF385DQ9H6B1 395 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF665Q9H7R5 613 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 OOEPA6NGQ2 149 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 SNRPGP15A8MWD9 76 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 LOXL3P58215 753 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 C21orf58P58505 322 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 CCL8P80075 99 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 TMEM116Q8NCL8 245 aa16.49■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF275Q9NSD4 429 aaPredicted RBP16.49■□□□□ 0.23
GABPB1-212ENST00000615671 MAP1LC3B2A6NCE7 125 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 PEX11BO96011 259 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 CELA2AP08217 269 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 SLC23A3Q6PIS1 610 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 TOMM20LQ6UXN7 152 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 OR2W3Q7Z3T1 314 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 NUFIP2Q7Z417 695 aaKnown RBP16.48■□□□□ 0.23
GABPB1-212ENST00000615671 PTP4A1Q93096 173 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 MAP1LC3BQ9GZQ8 125 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 IGHV3-72A0A0B4J1Y9 119 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 PDCD6O75340 191 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 CLN8Q9UBY8 286 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 PIGYQ3MUY2 71 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 OR4S2Q8NH73 311 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 NAA60Q9H7X0 242 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 SPINT1O43278 529 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 VAMP8Q9BV40 100 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 CTAG2O75638 210 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 SFT2D2O95562 160 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 C12orf73Q69YU5 71 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 ZNF66Q6ZN08 573 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
GABPB1-212ENST00000615671 A0A1B0GTQ1 180 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 C9orf170A2RU37 121 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 FCN1O00602 326 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 POLR2GP62487 172 aaKnown RBP eCLIP16.47■□□□□ 0.23
GABPB1-212ENST00000615671 WDR74Q6RFH5 385 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-212ENST00000615671 MDP1Q86V88 176 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 SMIM4Q8WVI0 70 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 RAC3P60763 192 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 GUK1Q16774 197 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 GTF2H5Q6ZYL4 71 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 HSD17B13Q7Z5P4 300 aaPredicted RBP16.47■□□□□ 0.23
GABPB1-212ENST00000615671 TTTY12Q9BZ98 90 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 PARP11Q9NR21 331 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 CLEC2AQ6UVW9 174 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 DHRS11Q6UWP2 260 aa16.47■□□□□ 0.23
GABPB1-212ENST00000615671 OR1K1Q8NGR3 316 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms