RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SLC22A6Q4U2R8 563 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 GLIPR1L1Q6UWM5 242 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 LINC00596Q86U02 117 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 OR8H2Q8N162 312 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 OSR2Q8N2R0 312 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 POM121Q96HA1 1249 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 C1orf147Q96MC9 270 aaPredicted RBP11.48□□□□□ -0.57
RNF40-212ENST00000602784 NKX3-1Q99801 234 aaPredicted RBP11.48□□□□□ -0.57
RNF40-212ENST00000602784 BEX2Q9BXY8 128 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 SHARPINQ9H0F6 387 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 IFT22Q9H7X7 185 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 EXOSC4Q9NPD3 245 aaKnown RBP11.48□□□□□ -0.57
RNF40-212ENST00000602784 TXNL4BQ9NX01 149 aaKnown RBP11.48□□□□□ -0.57
RNF40-212ENST00000602784 OPN4Q9UHM6 478 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 NAV3Q8IVL0 2385 aa11.48□□□□□ -0.57
RNF40-212ENST00000602784 TMEM82A0PJX8 343 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 SLC17A2O00624 439 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 PDCD5O14737 125 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 SLC22A1O15245 554 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 OR2H2O95918 312 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 CALCBP10092 127 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 MYL9P24844 172 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 DUSP1P28562 367 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 RBM11P57052 281 aaKnown RBP11.47□□□□□ -0.57
RNF40-212ENST00000602784 CHRFAM7AQ494W8 412 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 AWAT2Q6E213 333 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 C22orf42Q6IC83 251 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 Q6P435 159 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 GDPGP1Q6ZNW5 385 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 C17orf107Q6ZR85 190 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 C1orf122Q6ZSJ8 110 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 ASCC1Q8N9N2 400 aaKnown RBP11.47□□□□□ -0.57
RNF40-212ENST00000602784 OR6M1Q8NGM8 313 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 OR10K1Q8NGX5 313 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 PPP1R35Q8TAP8 253 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 GFI1Q99684 422 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 MRI1Q9BV20 369 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 ST3GAL6Q9Y274 331 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 AUP1Q9Y679 476 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 V9GY05 133 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
RNF40-212ENST00000602784 A0A0G2JK05 382 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 DEGS1O15121 323 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 PSPNO60542 156 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 AVPP01185 164 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 SMIM18P0DKX4 95 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 SERPINA2P20848 420 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 GABRR1P24046 479 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 CFPP27918 469 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 HTR2CP28335 458 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 SNU13P55769 128 aaKnown RBP11.46□□□□□ -0.57
RNF40-212ENST00000602784 TIMM50Q3ZCQ8 353 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.57
RNF40-212ENST00000602784 TPRA1Q86W33 373 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 KIR3DL3Q8N743 410 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
RNF40-212ENST00000602784 SLC25A28Q96A46 364 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 CST11Q9H112 138 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 AK6Q9Y3D8 172 aaKnown RBP11.46□□□□□ -0.57
RNF40-212ENST00000602784 KPTNQ9Y664 436 aa11.46□□□□□ -0.57
RNF40-212ENST00000602784 FAM90A10PA6NDY2 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A18PA6NE21 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A16PA6NEW6 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A20PA6NIJ5 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A8PA6NJQ4 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A7PA6NKC0 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A22PA8MWA6 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A12PA8MX19 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A5PA8MXJ8 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A23PA8MXZ1 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 H3BUI4 141 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 SLC33A1O00400 549 aaPredicted RBP11.45□□□□□ -0.58
RNF40-212ENST00000602784 MGST3O14880 152 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 BPNT1O95861 308 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 CSN2P05814 226 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A15PP0C7V4 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A13PP0C7W8 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A14PP0C7W9 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 FAM90A24PP0C7X0 464 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 ZNF44P15621 663 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 GADD45AP24522 165 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 ERP29P30040 261 aaKnown RBP11.45□□□□□ -0.58
RNF40-212ENST00000602784 RPL31P62899 125 aaKnown RBP11.45□□□□□ -0.58
RNF40-212ENST00000602784 MEF2CQ06413 473 aaPredicted RBP11.45□□□□□ -0.58
RNF40-212ENST00000602784 GRK1Q15835 563 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 MPV17LQ2QL34 196 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 PIGYQ3MUY2 71 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 GDPD3Q7L5L3 318 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 KCNG3Q8TAE7 436 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 NANPQ8TBE9 248 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 YIPF6Q96EC8 236 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 KCTD7Q96MP8 289 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 MRPS26Q9BYN8 205 aaKnown RBP11.45□□□□□ -0.58
RNF40-212ENST00000602784 OR51E2Q9H255 320 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
RNF40-212ENST00000602784 TRAV24A0A0B4J272 114 aa11.44□□□□□ -0.58
RNF40-212ENST00000602784 A0A1W2PPH5 198 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms