RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ZNF230Q9UIE0 474 aaPredicted RBP17.04■□□□□ 0.32
PNKP-214ENST00000600573 POM121CA8CG34 1229 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 OR7C1O76099 320 aaPredicted RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 RAP2BP61225 183 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 TSPAN5P62079 268 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 ZNF154Q13106 437 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 FIP1L1Q6UN15 594 aaKnown RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 PCSK4Q6UW60 755 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 WFDC8Q8IUA0 241 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 MAFIPQ8WZ33 124 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 GTF3AQ92664 365 aaKnown RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 HDHD3Q9BSH5 251 aaPredicted RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 ZNF442Q9H7R0 627 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 DUSP13Q9UII6 198 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 PLSCR5A0PG75 271 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 ATP6V1G2-DDX39BF2Z307 99 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 MLNRO43193 412 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 THBDP07204 575 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 FCGR3AP08637 254 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 PGA5P0DJD9 388 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 CD200P41217 278 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 ARPC4P59998 168 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 ERVK11-1P61568 191 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 SORDQ00796 357 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 SRSF7Q16629 238 aaKnown RBP eCLIP17.03■□□□□ 0.32
PNKP-214ENST00000600573 C22orf34Q6ZV56 151 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 C12orf45Q8N5I9 185 aaPredicted RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 ASB13Q8WXK3 278 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 RIMS4Q9H426 269 aaPredicted RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 CA10Q9NS85 328 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 ZNF581Q9P0T4 197 aa17.03■□□□□ 0.32
PNKP-214ENST00000600573 RCC2Q9P258 522 aaKnown RBP17.03■□□□□ 0.32
PNKP-214ENST00000600573 TLN1Q9Y490 2541 aaKnown RBP17.02■□□□□ 0.32
PNKP-214ENST00000600573 CEACAM18A8MTB9 384 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 PRKACAP17612 351 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 DNASE1P24855 282 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 FPR2P25090 351 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 UBE2MP61081 183 aaKnown RBP17.02■□□□□ 0.31
PNKP-214ENST00000600573 IFITM2Q01629 132 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 DHRS2Q13268 280 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 RBM39Q14498 530 aaKnown RBP17.02■□□□□ 0.31
PNKP-214ENST00000600573 ESPL1Q14674 2120 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 MPPED2Q15777 294 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 C17orf107Q6ZR85 190 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 LYG2Q86SG7 212 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 WDR86Q86TI4 376 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 OR2T35Q8NGX2 323 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 NRIP2Q9BQI9 281 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 CHIAQ9BZP6 476 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 ESRP2Q9H6T0 727 aaKnown RBP17.02■□□□□ 0.31
PNKP-214ENST00000600573 C12orf4Q9NQ89 552 aa17.02■□□□□ 0.31
PNKP-214ENST00000600573 ERRFI1Q9UJM3 462 aaPredicted RBP17.02■□□□□ 0.31
PNKP-214ENST00000600573 MAP1BP46821 2468 aaKnown RBP17.02■□□□□ 0.31
PNKP-214ENST00000600573 DPRXA6NFQ7 191 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 MCRIP1C9JLW8 97 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 H0YL77 283 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 GOSR2O14653 212 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 CDIPTO14735 213 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 RGS13O14921 159 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 OR2A4O95047 310 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 PTBP3O95758 552 aaKnown RBP17.01■□□□□ 0.31
PNKP-214ENST00000600573 GRPP07492 148 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 GRK1Q15835 563 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 SPIN3Q5JUX0 258 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 Q6ZR03 302 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 LHFPL1Q86WI0 220 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 POC1AQ8NBT0 407 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 MARCH1Q8TCQ1 289 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 MRPL24Q96A35 216 aaKnown RBP17.01■□□□□ 0.31
PNKP-214ENST00000600573 WFIKKN1Q96NZ8 548 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 OR2A7Q96R45 310 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 PLSCR3Q9NRY6 295 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 GLS2Q9UI32 602 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 ANXA10Q9UJ72 324 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 FZR1Q9UM11 496 aa17.01■□□□□ 0.31
PNKP-214ENST00000600573 HLA-AP01891 365 aaKnown RBP17■□□□□ 0.31
PNKP-214ENST00000600573 ZBTB25P24278 435 aa17■□□□□ 0.31
PNKP-214ENST00000600573 ECI1P42126 302 aa17■□□□□ 0.31
PNKP-214ENST00000600573 OVCH2Q7RTZ1 564 aa17■□□□□ 0.31
PNKP-214ENST00000600573 BATF2Q8N1L9 274 aa17■□□□□ 0.31
PNKP-214ENST00000600573 C9orf62Q8N4C0 152 aa17■□□□□ 0.31
PNKP-214ENST00000600573 TMEM246Q9BRR3 403 aa17■□□□□ 0.31
PNKP-214ENST00000600573 SLA2Q9H6Q3 261 aa17■□□□□ 0.31
PNKP-214ENST00000600573 FN3KRPQ9HA64 309 aa17■□□□□ 0.31
PNKP-214ENST00000600573 ZNF286AQ9HBT8 521 aa17■□□□□ 0.31
PNKP-214ENST00000600573 PIPOXQ9P0Z9 390 aa17■□□□□ 0.31
PNKP-214ENST00000600573 MGAT4AQ9UM21 535 aa17■□□□□ 0.31
PNKP-214ENST00000600573 BOLA1Q9Y3E2 137 aa17■□□□□ 0.31
PNKP-214ENST00000600573 RHBDL1O75783 438 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 GSTT2P0CG29 244 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 CD34P28906 385 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 DAZAP2Q15038 168 aaPredicted RBP16.99■□□□□ 0.31
PNKP-214ENST00000600573 ZNF146Q15072 292 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 SURF2Q15527 256 aaPredicted RBP16.99■□□□□ 0.31
PNKP-214ENST00000600573 C11orf88Q6PI97 169 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 PEG10Q86TG7 708 aaKnown RBP16.99■□□□□ 0.31
PNKP-214ENST00000600573 UXS1Q8NBZ7 420 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 OR10Z1Q8NGY1 313 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 MSL2Q9HCI7 577 aa16.99■□□□□ 0.31
PNKP-214ENST00000600573 KCNJ16Q9NPI9 418 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms