RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NUP37Q8NFH4 326 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 OR51S1Q8NGJ8 323 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 LILRB4Q8NHJ6 448 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 LINC01560Q8TB33 94 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 RNASE6Q93091 150 aaKnown RBP8.62□□□□□ -1.03
APOC1-201ENST00000586638 MRPL24Q96A35 216 aaKnown RBP8.62□□□□□ -1.03
APOC1-201ENST00000586638 MRPS24Q96EL2 167 aaKnown RBP8.62□□□□□ -1.03
APOC1-201ENST00000586638 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 TMUB1Q9BVT8 246 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 BEX2Q9BXY8 128 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 BEX1Q9HBH7 125 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 KCNJ16Q9NPI9 418 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 UFSP2Q9NUQ7 469 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 ZNF701Q9NV72 531 aaPredicted RBP8.62□□□□□ -1.03
APOC1-201ENST00000586638 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 ZNF230Q9UIE0 474 aaPredicted RBP8.62□□□□□ -1.03
APOC1-201ENST00000586638 HCFC1P51610 2035 aa8.62□□□□□ -1.03
APOC1-201ENST00000586638 FAM221AA4D161 298 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A10PA6NDY2 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A18PA6NE21 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A16PA6NEW6 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A20PA6NIJ5 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A8PA6NJQ4 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A7PA6NKC0 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A22PA8MWA6 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A12PA8MX19 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A5PA8MXJ8 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A23PA8MXZ1 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 HSPB6O14558 160 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 CA11O75493 328 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 NDUFB6O95139 128 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 IGHV3-13P01766 116 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 PMP2P02689 132 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A15PP0C7V4 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A13PP0C7W8 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A14PP0C7W9 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAM90A24PP0C7X0 464 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 PGA5P0DJD9 388 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 HOXB4P17483 251 aaPredicted RBP8.61□□□□□ -1.03
APOC1-201ENST00000586638 AMY2BP19961 511 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 HRH1P35367 487 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 CBX5P45973 191 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 MAB21L1Q13394 359 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 IL13RA2Q14627 380 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 ARL6IP1Q15041 203 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 MPPED2Q15777 294 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 SPRNQ5BIV9 151 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 RNASE10Q5GAN6 216 aaKnown RBP8.61□□□□□ -1.03
APOC1-201ENST00000586638 NHLRC3Q5JS37 347 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 BPIFB2Q8N4F0 458 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 OR2Z1Q8NG97 314 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 OR13G1Q8NGZ3 307 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 NEUROG1Q92886 237 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FBXW5Q969U6 566 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 ELMOD3Q96FG2 381 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 CMSS1Q9BQ75 279 aaKnown RBP8.61□□□□□ -1.03
APOC1-201ENST00000586638 GINS4Q9BRT9 223 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 FAAP24Q9BTP7 215 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 ZNF442Q9H7R0 627 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 ZNF107Q9UII5 783 aaPredicted RBP8.61□□□□□ -1.03
APOC1-201ENST00000586638 HSF4Q9ULV5 492 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 POLDIP2Q9Y2S7 368 aa8.61□□□□□ -1.03
APOC1-201ENST00000586638 RAI1Q7Z5J4 1906 aaPredicted RBP8.6□□□□□ -1.03
APOC1-201ENST00000586638 IGKV1D-8A0A087WSZ0 117 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 A0A1B0GWJ7 208 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 hCG_1807616A0A1W2PRN6 198 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 WNT9BO14905 357 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 SPRY3O43610 288 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NXPH2O95156 264 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 FCGR3AP08637 254 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 IGFBP2P18065 325 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NAT1P18440 290 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 CD200P41217 278 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 BTG1P62324 171 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 RBMS2Q15434 407 aaKnown RBP8.6□□□□□ -1.03
APOC1-201ENST00000586638 MICBQ29980 383 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 MPV17LQ2QL34 196 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 SCGB2B2Q4G0G5 96 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 FAM76BQ5HYJ3 339 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NCMAPQ5T1S8 102 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 Q6ZPA2 131 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 SSX8Q7RTT4 187 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 ZNF554Q86TJ5 538 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 HOGA1Q86XE5 327 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
APOC1-201ENST00000586638 POC1AQ8NBT0 407 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NEK7Q8TDX7 302 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 ITLN1Q8WWA0 313 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 GIMAP1Q8WWP7 306 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 DEDD2Q8WXF8 326 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 SLC6A7Q99884 636 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NRIP2Q9BQI9 281 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 NEURL2Q9BR09 285 aa8.6□□□□□ -1.03
APOC1-201ENST00000586638 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms