RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MGST3O14880 152 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 OGG1O15527 345 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 PSPNO60542 156 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 NDUFA7O95182 113 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 DLX6P56179 175 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 RELBQ01201 579 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 CRIP3Q6Q6R5 217 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 GDPGP1Q6ZNW5 385 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 TPRX1Q8N7U7 411 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 BEND2Q8NDZ0 799 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 OR52N1Q8NH53 320 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 C17orf50Q8WW18 174 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 ZNF714Q96N38 554 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 RHOFQ9HBH0 211 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 VPREB3Q9UKI3 123 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 SIRT4Q9Y6E7 314 aaPredicted RBP16.64■□□□□ 0.25
SS18-224ENST00000584083 KIAA2026Q5HYC2 2103 aa16.64■□□□□ 0.25
SS18-224ENST00000584083 A0A1B0GUS0 222 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 OR2H2O95918 312 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 OR3A1P47881 315 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 BMXP51813 675 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 ZP1P60852 638 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 OR51A2Q8NGJ7 313 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 OR5R1Q8NH85 324 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 SGMS2Q8NHU3 365 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 RPS4Y2Q8TD47 263 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 TMEM106AQ96A25 262 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 SMIM19Q96E16 107 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 ZNF281Q9Y2X9 895 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 MMP24Q9Y5R2 645 aa16.63■□□□□ 0.25
SS18-224ENST00000584083 XPNPEP2O43895 674 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 LALBAP00709 142 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 RBP4P02753 201 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 ZNF44P15621 663 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 TRAPPC6BQ86SZ2 158 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 STX19Q8N4C7 294 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 ZFP41Q8N8Y5 198 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 BPIFB6Q8NFQ5 453 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 OR13D1Q8NGV5 346 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 TNFAIP8L1Q8WVP5 186 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 GHSRQ92847 366 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 SSX3Q99909 188 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 FAM192AQ9GZU8 254 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 CNOT2Q9NZN8 540 aaKnown RBP16.62■□□□□ 0.25
SS18-224ENST00000584083 NKX1-2Q9UD57 310 aaPredicted RBP16.62■□□□□ 0.25
SS18-224ENST00000584083 LINC00312Q9Y6C7 94 aa16.62■□□□□ 0.25
SS18-224ENST00000584083 H3BUX3 64 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 DEGS1O15121 323 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 IGHV1-8P0DP01 117 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 MTNR1BP49286 362 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 P2RX3P56373 397 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 PPP3R1P63098 170 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 SLC34A1Q06495 639 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 DHRS7BQ6IAN0 325 aaPredicted RBP16.61■□□□□ 0.25
SS18-224ENST00000584083 ASPHD2Q6ICH7 369 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 LAIR2Q6ISS4 152 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 ZNF529Q6P280 563 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 AHSA2Q719I0 299 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 TCF23Q7RTU1 214 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 NR1H4Q96RI1 486 aaPredicted RBP16.61■□□□□ 0.25
SS18-224ENST00000584083 PPA2Q9H2U2 334 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 PSORS1C1Q9UIG5 152 aa16.61■□□□□ 0.25
SS18-224ENST00000584083 CLPSL1A2RUU4 121 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 FUOMA2VDF0 154 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 GABRPO00591 440 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 ARG1P05089 322 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 LMO1P25800 156 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 PAX6P26367 422 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 ERP29P30040 261 aaKnown RBP16.6■□□□□ 0.25
SS18-224ENST00000584083 DYNC1I2Q13409 638 aaKnown RBP16.6■□□□□ 0.25
SS18-224ENST00000584083 LRRC75BQ2VPJ9 315 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 OLFML2AQ68BL7 652 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 DMKNQ6E0U4 476 aaPredicted RBP16.6■□□□□ 0.25
SS18-224ENST00000584083 PXT1Q8NFP0 134 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 OR13C5Q8NGS8 318 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 FBLIM1Q8WUP2 373 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 TFAP2CQ92754 450 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 AJUBAQ96IF1 538 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 SLITRK2Q9H156 845 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 MEGF9Q9H1U4 602 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 TMEM138Q9NPI0 162 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 PLCXD1Q9NUJ7 323 aa16.6■□□□□ 0.25
SS18-224ENST00000584083 A0A0G2JK05 382 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 MYL12BO14950 172 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 AESQ08117 197 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 RSU1Q15404 277 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 Q6P435 159 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 CHST4Q8NCG5 386 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 ZNF485Q8NCK3 441 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 NKX3-1Q99801 234 aaPredicted RBP16.59■□□□□ 0.25
SS18-224ENST00000584083 ING3Q9NXR8 418 aa16.59■□□□□ 0.25
SS18-224ENST00000584083 UBE2J1Q9Y385 318 aaPredicted RBP16.59■□□□□ 0.25
SS18-224ENST00000584083 TRGV10A0A0A0MS01 117 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 PNMA8CA0A1B0GUJ8 204 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 ALDOBP05062 364 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 C21orf33P30042 268 aaPredicted RBP16.58■□□□□ 0.24
SS18-224ENST00000584083 BDKRB2P30411 391 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 TGFBR2P37173 567 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 TAS2R43P59537 309 aa16.58■□□□□ 0.24
SS18-224ENST00000584083 GABPB1Q06547 395 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms