RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF702PQ9H963 129 aa11.69□□□□□ -0.54
SMARCE1-216ENST00000580419 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 SAC3D1A6NKF1 404 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 H3BNX3 289 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 EI24O14681 340 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 APOL3O95236 402 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 FADS2O95864 444 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 IGLV1-47P01700 117 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 PIPP12273 146 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 HTR1DP28221 377 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 OR3A1P47881 315 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 NPBWR2P48146 333 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 ARHGDIBP52566 201 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 NANOS3P60323 173 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 RAB40BQ12829 278 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 ALKBH1Q13686 389 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 SSX2Q16385 188 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 LY6EQ16553 131 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 ELP2Q6IA86 826 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 CCBE1Q6UXH8 406 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 SERPINA12Q8IW75 414 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 RDH10Q8IZV5 341 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 Q8NFD4 153 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 OR5D14Q8NGL3 314 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 RHOXF1Q8NHV9 184 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF596Q8TC21 504 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 AKR1E2Q96JD6 320 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 LINC00574Q9H8X3 128 aa11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 EXOSC4Q9NPD3 245 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 RBFOX1Q9NWB1 397 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-216ENST00000580419 TRGV10A0A0A0MS01 117 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 PRKACAP17612 351 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 BCL3P20749 454 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 GABRR1P24046 479 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF529Q6P280 563 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 REC114Q7Z4M0 266 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 NDUFA11Q86Y39 141 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 DYNAPQ8N1N2 210 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF676Q8N7Q3 588 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 OR4S1Q8NGB4 309 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 PYDC1Q8WXC3 89 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 LGALS12Q96DT0 336 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 RDH12Q96NR8 316 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF649Q9BS31 505 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 C9orf16Q9BUW7 83 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 ZCCHC4Q9H5U6 513 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 LIN7BQ9HAP6 207 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 DPM3Q9P2X0 92 aa11.67□□□□□ -0.54
SMARCE1-216ENST00000580419 SULT1B1O43704 296 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 XPNPEP2O43895 674 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 OR2H2O95918 312 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 BRS3P32247 399 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 KCNJ3P48549 501 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 MTNR1BP49286 362 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 FAM189A2Q15884 450 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 CCDC58Q4VC31 144 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 LPCAT4Q643R3 524 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
SMARCE1-216ENST00000580419 IGKV1-12A0A0C4DH73 117 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 ZNF729A6NN14 1252 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 M0QZK8 103 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 F2RL2O00254 374 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 FBXO24O75426 580 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 INMTO95050 263 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 IGKV1D-12P01611 117 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OCM2P0CE71 109 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OCMP0CE72 109 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 CEACAM3P40198 252 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 POU3F4P49335 361 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 ZP1P60852 638 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 KISS1Q15726 138 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 KLHL22Q53GT1 634 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 CCDC144NLQ6NUI1 221 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 Q6P435 159 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 ASCL4Q6XD76 172 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 SLC16A12Q6ZSM3 486 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 CBR4Q8N4T8 237 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OR51T1Q8NGJ9 327 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 ALG8Q9BVK2 526 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 PCDHB16Q9NRJ7 776 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 ERVK13-1Q9NX77 482 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 MYRFQ9Y2G1 1151 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 SIGLEC9Q9Y336 463 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 RPL36Q9Y3U8 105 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 GMPPBQ9Y5P6 360 aa11.65□□□□□ -0.54
SMARCE1-216ENST00000580419 DNAH3Q8TD57 4116 aa11.64□□□□□ -0.55
SMARCE1-216ENST00000580419 ODAMA1E959 279 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms