RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 RANBP3Q9H6Z4 567 aaPredicted RBP24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 EHFQ9NZC4 300 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 MGAT4CQ9UBM8 478 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 GPR132Q9UNW8 380 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF154Q13106 437 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 Q6ZS49 121 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 OR2AK2Q8NG84 335 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 GTF3AQ92664 365 aaKnown RBP24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF442Q9H7R0 627 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 SPEF1Q9Y4P9 236 aa24.18■■□□□ 1.46
CTDNEP1-210ENST00000574322 MLNRO43193 412 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 RHBDL1O75783 438 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 PRKACAP17612 351 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZBTB25P24278 435 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 UBE2MP61081 183 aaKnown RBP24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 PDCD1Q15116 288 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 SURF2Q15527 256 aaPredicted RBP24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 AADACL3Q5VUY0 350 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 BRICD5Q6PL45 260 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 BATF2Q8N1L9 274 aa24.17■■□□□ 1.46
CTDNEP1-210ENST00000574322 SHANK1Q9Y566 2161 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 M0R1B8 84 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 CRYAAP02489 173 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 GIPP09681 153 aaPredicted RBP24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 FPR2P25090 351 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 TAS2R31P59538 309 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 NKX6-1P78426 367 aaPredicted RBP24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 DHRS2Q13268 280 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 NLRC3Q7RTR2 1065 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 SSX8Q7RTT4 187 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 RELL2Q8NC24 303 aaPredicted RBP24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 TMEM185AQ8NFB2 350 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 MARCH1Q8TCQ1 289 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 CXXC4Q9H2H0 198 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 DECR2Q9NUI1 292 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 IL36RNQ9UBH0 155 aa24.16■■□□□ 1.46
CTDNEP1-210ENST00000574322 SMLR1H3BR10 107 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 TIMM8AO60220 97 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 NOS1APO75052 506 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 PGA5P0DJD9 388 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF250P15622 560 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 CCKARP32238 428 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 FABP6P51161 128 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 MPPED2Q15777 294 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 IGFBP7Q16270 282 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 RGS7BPQ6MZT1 257 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF488Q96MN9 340 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 DMRTA2Q96SC8 542 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 VKORC1Q9BQB6 163 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 NRIP2Q9BQI9 281 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 TLNRD1Q9H1K6 362 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 CA10Q9NS85 328 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 PIPOXQ9P0Z9 390 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 H0YL77 283 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 GLRXP35754 106 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ECI1P42126 302 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ARPC4P59998 168 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZNF660Q6AZW8 331 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 C17orf107Q6ZR85 190 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 LYG2Q86SG7 212 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 C12orf45Q8N5I9 185 aaPredicted RBP24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ZFAND1Q8TCF1 268 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 ASB13Q8WXK3 278 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 DYRK2Q92630 601 aa24.15■■□□□ 1.46
CTDNEP1-210ENST00000574322 C16orf97H3BN30 126 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 SDCBPO00560 298 aaPredicted RBP24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 NAPSAO96009 420 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 DHODHQ02127 395 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 IKZF1Q13422 519 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 DHRS11Q6UWP2 260 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 Q6ZR03 302 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 GALNT11Q8NCW6 608 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 ZNF286AQ9HBT8 521 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 NECAP2Q9NVZ3 263 aa24.14■■□□□ 1.45
CTDNEP1-210ENST00000574322 HEATR1Q9H583 2144 aaKnown RBP24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 RAP2BP61225 183 aa24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 Q6ZPA2 131 aa24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 MCRIP1C9JLW8 97 aa24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 DHRS9Q9BPW9 319 aa24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 RIMS4Q9H426 269 aaPredicted RBP24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 C5orf66Q9H5L9 145 aa24.13■■□□□ 1.45
CTDNEP1-210ENST00000574322 RP1L1Q8IWN7 2480 aaPredicted RBP24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 CDIPTO14735 213 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 IGHV3-13P01766 116 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 NPY4RP50391 375 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 PPP1R1AQ13522 171 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 C22orf34Q6ZV56 151 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 C11orf53Q8IXP5 236 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 HES4Q9HCC6 221 aa24.12■■□□□ 1.45
CTDNEP1-210ENST00000574322 C9orf170A2RU37 121 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 OR5H14A6NHG9 310 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 POM121CA8CG34 1229 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 HLA-AP01891 365 aaKnown RBP24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 OR5H8P0DN80 308 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 MZT1Q08AG7 82 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 TMEM128Q5BJH2 165 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 Q6P435 159 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 POC1AQ8NBT0 407 aa24.11■■□□□ 1.45
CTDNEP1-210ENST00000574322 ADAD2Q8NCV1 583 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms