RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 OR2J1Q9GZK6 312 aa17.13■□□□□ 0.33
PSEN1-225ENST00000560005 PURGQ9UJV8 347 aaKnown RBP17.13■□□□□ 0.33
PSEN1-225ENST00000560005 FAM230AA0A1W2PPH8 454 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 OR5B21A6NL26 309 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 IQCF6A8MYZ5 107 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 CLDN34H7C241 214 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 FOXH1O75593 365 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 CHRM2P08172 466 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 OMGP23515 440 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 INPP1P49441 399 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 MMP15P51511 669 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 MBNL2Q5VZF2 373 aaKnown RBP17.12■□□□□ 0.33
PSEN1-225ENST00000560005 TRIQKQ629K1 86 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 MINDY2Q8NBR6 621 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 C19orf18Q8NEA5 215 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 TNFAIP8L1Q8WVP5 186 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 FAM46BQ96A09 425 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 ITPKCQ96DU7 683 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 MARS2Q96GW9 593 aaKnown RBP17.12■□□□□ 0.33
PSEN1-225ENST00000560005 URM1Q9BTM9 101 aaKnown RBP17.12■□□□□ 0.33
PSEN1-225ENST00000560005 METTL9Q9H1A3 318 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 ATG5Q9H1Y0 275 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 ING4Q9UNL4 249 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 AUP1Q9Y679 476 aa17.12■□□□□ 0.33
PSEN1-225ENST00000560005 NBEAL2Q6ZNJ1 2754 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 TMEM14DPA8MWL7 114 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 TMEM225BP0DP42 221 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 KITLGP21583 273 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 MZT1Q08AG7 82 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 OR2T2Q6IF00 324 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 ASCL4Q6XD76 172 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 LYSMD2Q8IV50 215 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 SAXO1Q8IYX7 474 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 SPERTQ8NA61 448 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 PXT1Q8NFP0 134 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 KLF14Q8TD94 323 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-225ENST00000560005 NPRL2Q8WTW4 380 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 SDHCQ99643 169 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-225ENST00000560005 MICU1Q9BPX6 476 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 POFUT1Q9H488 388 aa17.11■□□□□ 0.33
PSEN1-225ENST00000560005 MRPS7Q9Y2R9 242 aaKnown RBP17.11■□□□□ 0.33
PSEN1-225ENST00000560005 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-225ENST00000560005 SPRY3O43610 288 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 GSTZ1O43708 216 aaPredicted RBP17.1■□□□□ 0.33
PSEN1-225ENST00000560005 KDM4BO94953 1096 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 CYB5AP00167 134 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 VSIG8P0DPA2 414 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 CDK2P24941 298 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 OR3A4PP47883 348 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF81P51508 661 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 QRFPP83859 136 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF154Q13106 437 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 MRPS24Q96EL2 167 aaKnown RBP17.1■□□□□ 0.33
PSEN1-225ENST00000560005 SPACA5Q96QH8 159 aa17.1■□□□□ 0.33
PSEN1-225ENST00000560005 PQLC2LA1A4F0 135 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 TRAPPC2LH3BP13 241 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 IGHV1-46P01743 117 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 IL7P13232 177 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 GNG3P63215 75 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 PSG7Q13046 419 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 ARL6IP1Q15041 203 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 RSU1Q15404 277 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 FAM209AQ5JX71 171 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 SPATA46Q5T0L3 261 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 ZNF573Q86YE8 665 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 MKXQ8IYA7 352 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 WFDC12Q8WWY7 111 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 OR5P3Q8WZ94 311 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 RFT1Q96AA3 541 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 RTL8AQ9BWD3 113 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 TMEM59Q9BXS4 323 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 MS4A7Q9GZW8 240 aaPredicted RBP17.09■□□□□ 0.33
PSEN1-225ENST00000560005 TMEM100Q9NV29 134 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 IL36GQ9NZH8 169 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 MMP24Q9Y5R2 645 aa17.09■□□□□ 0.33
PSEN1-225ENST00000560005 VGLL3A8MV65 326 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 GABARAPH6UMI1 98 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 IGHV3-13P01766 116 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 HLA-DQB1P01920 261 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 CSTBP04080 98 aaKnown RBP17.08■□□□□ 0.32
PSEN1-225ENST00000560005 ZP1P60852 638 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 PDZK1IP1Q13113 114 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 STEAP3Q658P3 488 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 OR8G5Q8NG78 346 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 OR56B1Q8NGI3 324 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 OR8S1Q8NH09 359 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 FCAMRQ8WWV6 532 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 RNF170Q96K19 258 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 ABHD1Q96SE0 405 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 THAP7Q9BT49 309 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-225ENST00000560005 RHOFQ9HBH0 211 aa17.08■□□□□ 0.32
PSEN1-225ENST00000560005 SOX21Q9Y651 276 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-225ENST00000560005 H3BUI4 141 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 SULT1C2O00338 296 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 TIMM8AO60220 97 aaPredicted RBP17.07■□□□□ 0.32
PSEN1-225ENST00000560005 CRTAPO75718 401 aaPredicted RBP17.07■□□□□ 0.32
PSEN1-225ENST00000560005 KNG1P01042 644 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 TAS2R20P59543 309 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 BAK1Q16611 211 aa17.07■□□□□ 0.32
PSEN1-225ENST00000560005 SLC22A6Q4U2R8 563 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms