RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 LEUTXA8MZ59 168 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 F8VVB4 439 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 F8VWA3 439 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 DEGS1O15121 323 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 IGHA1P01876 353 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 TMEM225BP0DP42 221 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 DBTP11182 482 aaKnown RBP10.16□□□□□ -0.78
SNX1-209ENST00000559961 MNDAP41218 407 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 KIR3DL2P43630 455 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 NPBWR2P48146 333 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 ALDH3A2P51648 485 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 GBX2P52951 348 aaPredicted RBP10.16□□□□□ -0.78
SNX1-209ENST00000559961 ZNF85Q03923 595 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 SLC25A30Q5SVS4 291 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CRIP3Q6Q6R5 217 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CCDC121Q6ZUS5 278 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 C16orf82Q7Z2V1 217 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 REC114Q7Z4M0 266 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CENPVQ7Z7K6 275 aaPredicted RBP10.16□□□□□ -0.78
SNX1-209ENST00000559961 NDUFA11Q86Y39 141 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 SERPINA12Q8IW75 414 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 ABHD12Q8N2K0 398 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 TPRX1Q8N7U7 411 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CHST4Q8NCG5 386 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 HAVCR2Q8TDQ0 301 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 TSEN15Q8WW01 171 aaKnown RBP10.16□□□□□ -0.78
SNX1-209ENST00000559961 PYDC1Q8WXC3 89 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CFHR4Q92496 578 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 R3HDM4Q96D70 268 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 ADAT3Q96EY9 351 aaPredicted RBP10.16□□□□□ -0.78
SNX1-209ENST00000559961 HRASLS5Q96KN8 279 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 GPER1Q99527 375 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 ZCCHC4Q9H5U6 513 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 HMG20AQ9NP66 347 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 FRRS1LQ9P0K9 344 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
SNX1-209ENST00000559961 CHST1O43916 411 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 ALPLP05186 524 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 CCDC159P0C7I6 412 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 CALCBP10092 127 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 PTGFRP43088 359 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 ALKBH1Q13686 389 aaKnown RBP10.15□□□□□ -0.78
SNX1-209ENST00000559961 ZIK1Q3SY52 487 aaPredicted RBP10.15□□□□□ -0.78
SNX1-209ENST00000559961 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 FDX2Q6P4F2 183 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 SAXO1Q8IYX7 474 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 ZNF565Q8N9K5 539 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 OR13C9Q8NGT0 318 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 RFT1Q96AA3 541 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 C4orf36Q96KX1 117 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 OR5M11Q96RB7 305 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 MBOAT4Q96T53 435 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 C9orf16Q9BUW7 83 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 INPP5EQ9NRR6 644 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 FAM53CQ9NYF3 392 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 TAS2R3Q9NYW6 316 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 DHDHQ9UQ10 334 aa10.15□□□□□ -0.78
SNX1-209ENST00000559961 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 EI24O14681 340 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 OR2H2O95918 312 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 MT-ND2P03891 347 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 CDK2P24941 298 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 ISL1P61371 349 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 KLHL22Q53GT1 634 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 KRBOX4Q5JUW0 171 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 HEPN1Q6WQI6 88 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 SATL1Q86VE3 508 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 DYNAPQ8N1N2 210 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 Q8N2B8 174 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 OR5AK2Q8NH90 309 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 SGCDQ92629 289 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 S100A13Q99584 98 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 ALG8Q9BVK2 526 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 BARHL1Q9BZE3 327 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 PCDHB16Q9NRJ7 776 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 ING3Q9NXR8 418 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
SNX1-209ENST00000559961 RPL36Q9Y3U8 105 aaKnown RBP10.14□□□□□ -0.79
SNX1-209ENST00000559961 TRRAPQ9Y4A5 3859 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 MEGF8Q7Z7M0 2845 aa10.14□□□□□ -0.79
SNX1-209ENST00000559961 IGKV1-9A0A0C4DH69 117 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 M0QZK8 103 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 PSPNO60542 156 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 KDM4BO94953 1096 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 CLIC3O95833 236 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 CD2P06729 351 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 FAM106CPP0CH98 169 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 PF4V1P10720 104 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 CD28P10747 220 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 RAB3AP20336 220 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 C21orf33P30042 268 aaPredicted RBP10.13□□□□□ -0.79
SNX1-209ENST00000559961 OR3A1P47881 315 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 MTNR1BP49286 362 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 BDH1Q02338 343 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 AESQ08117 197 aa10.13□□□□□ -0.79
SNX1-209ENST00000559961 GALEQ14376 348 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms