RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 SUMF2Q8NBJ7 301 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 S100ZQ8WXG8 99 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 RAB3CQ96E17 227 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 TIMD4Q96H15 378 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 CYYR1Q96J86 154 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 PECRQ9BY49 303 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 CHODLQ9H9P2 273 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 ZMAT3Q9HA38 289 aaKnown RBP8.74□□□□□ -1.01
TPM1-221ENST00000559831 BARX1Q9HBU1 254 aaPredicted RBP8.74□□□□□ -1.01
TPM1-221ENST00000559831 AKIP1Q9NQ31 210 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 PLEKHJ1Q9NW61 149 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 METRNQ9UJH8 293 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 EDARQ9UNE0 448 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 V9GYH0 126 aa8.74□□□□□ -1.01
TPM1-221ENST00000559831 IGKV1D-17A0A075B6S4 117 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 A0A0G2JMP0 313 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 A0A0X1KG70 313 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 UBE2QL1A1L167 161 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 TMEM235A6NFC5 223 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 FOXI3A8MTJ6 420 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 SLC33A1O00400 549 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 PTHLHP12272 177 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 HIST1H1DP16402 221 aaKnown RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 FUT3P21217 361 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 CHATP28329 748 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 MDH2P40926 338 aaKnown RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 NR4A2P43354 598 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 GPR6P46095 362 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 PDLIM4P50479 330 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 TMEM50BP56557 158 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 ZNF846Q147U1 533 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 ZMYND11Q15326 602 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 CDNFQ49AH0 187 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 PAN3Q58A45 887 aaKnown RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 PLAC9Q5JTB6 97 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 OLFML2AQ68BL7 652 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 STUMQ69YW2 141 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 LINC00299Q6ZSB3 139 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 BPIFB2Q8N4F0 458 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 CD177Q8N6Q3 437 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 ASCC1Q8N9N2 400 aaKnown RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 OR4M2Q8NGB6 313 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 ANGPTL6Q8NI99 470 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 DYRK2Q92630 601 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 RAB1CQ92928 201 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 GCDHQ92947 438 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 CCL13Q99616 98 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 DPCDQ9BVM2 203 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 PPA2Q9H2U2 334 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 MYOZ1Q9NP98 299 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 ZNF701Q9NV72 531 aaPredicted RBP8.73□□□□□ -1.01
TPM1-221ENST00000559831 ING3Q9NXR8 418 aa8.73□□□□□ -1.01
TPM1-221ENST00000559831 LRBAP50851 2863 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 SPG11Q96JI7 2443 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 TRAV24A0A0B4J272 114 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 MCRIP1C9JLW8 97 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 H3BUI4 141 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 MFNGO00587 321 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 IGHV2-70P01814 119 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ETV6P41212 452 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 TMEM33P57088 247 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 GNG2P59768 71 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 PITPNAQ00169 270 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ZNF45Q02386 682 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ARFRP1Q13795 201 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 KCNJ8Q15842 424 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ZNF260Q3ZCT1 412 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 PYHIN1Q6K0P9 492 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 FAM216BQ8N7L0 139 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 TMEM185AQ8NFB2 350 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 POM121Q96HA1 1249 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 GAFA1Q96PS6 74 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ABHD1Q96SE0 405 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 SULT4A1Q9BR01 284 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 NUDT16L1Q9BRJ7 211 aaKnown RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 TMEM246Q9BRR3 403 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 GSX2Q9BZM3 304 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 WDR12Q9GZL7 423 aaKnown RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 CHST6Q9GZX3 395 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 NARFLQ9H6Q4 476 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ZNF665Q9H7R5 613 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 AUNIPQ9H7T9 357 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 IFT22Q9H7X7 185 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 SPACA1Q9HBV2 294 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 TMEM165Q9HC07 324 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 BEX4Q9NWD9 120 aaPredicted RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 RCC2Q9P258 522 aaKnown RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 AK3Q9UIJ7 227 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ZNF222Q9UK12 451 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
TPM1-221ENST00000559831 RABL2BQ9UNT1 228 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 DOCK11Q5JSL3 2073 aa8.72□□□□□ -1.01
TPM1-221ENST00000559831 A0A1B0GW55 424 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 TMEM82A0PJX8 343 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 MEIS3P1A6NDR6 274 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 J3QRK9 145 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 TMPRSS2O15393 492 aa8.71□□□□□ -1.02
TPM1-221ENST00000559831 ADAM20O43506 726 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms