RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 STX3Q13277 289 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 BTN1A1Q13410 526 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 KRTAP13-2Q52LG2 175 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 DEGS2Q6QHC5 323 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 UGT2A3Q6UWM9 527 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 HMGN2P46Q86SG4 172 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 PDPNQ86YL7 162 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 CYP4Z2PQ8N1L4 340 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 RNF10Q8N5U6 811 aaKnown RBP2.3□□□□□ -2.04
COPS2-204ENST00000558545 CCNYL1Q8N7R7 359 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 ORAOV1Q8WV07 137 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 ZNF396Q96N95 335 aaPredicted RBP2.3□□□□□ -2.04
COPS2-204ENST00000558545 RILPQ96NA2 401 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 ZNF2Q9BSG1 426 aaPredicted RBP2.3□□□□□ -2.04
COPS2-204ENST00000558545 PORCNQ9H237 461 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 ZSCAN16Q9H4T2 348 aaPredicted RBP2.3□□□□□ -2.04
COPS2-204ENST00000558545 PRORYQ9H606 182 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 PLEKHF2Q9H8W4 249 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 NLE1Q9NVX2 485 aaPredicted RBP2.3□□□□□ -2.04
COPS2-204ENST00000558545 NCOA3Q9Y6Q9 1424 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 NRKQ7Z2Y5 1582 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 NRXN3Q9Y4C0 1643 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 COL24A1Q17RW2 1714 aa2.3□□□□□ -2.04
COPS2-204ENST00000558545 THSD7AQ9UPZ6 1657 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 CDC42BPGQ6DT37 1551 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 BLMP54132 1417 aaPredicted RBP2.29□□□□□ -2.04
COPS2-204ENST00000558545 MIA2Q96PC5 1412 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 SETD5Q9C0A6 1442 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 TMEM72A0PK05 275 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 RPL36A-HNRNPH2H7BZ11 118 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 K7ERQ8 282 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 DHRS3O75911 302 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 IGKV1D-16P01601 117 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 CD28P10747 220 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 TAC1P20366 129 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 MPIP34949 423 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 XKP51811 444 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 UBE2KP61086 200 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 ACTL10Q5JWF8 245 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 PRSS54Q6PEW0 395 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 ITPRIPQ8IWB1 547 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 BBS7Q8IWZ6 715 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 ZNF101Q8IZC7 436 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 STK40Q8N2I9 435 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 OR8G5Q8NG78 346 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 OR2M7Q8NG81 312 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 OR4K2Q8NGD2 314 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 OR51Q1Q8NH59 317 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 IFT81Q8WYA0 676 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 C22orf15Q8WYQ4 148 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 RMI2Q96E14 147 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 IP6K3Q96PC2 410 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 API5Q9BZZ5 524 aaKnown RBP2.29□□□□□ -2.04
COPS2-204ENST00000558545 GOLPH3Q9H4A6 298 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 SDHAF3Q9NRP4 125 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 RBM22Q9NW64 420 aaKnown RBP eCLIP2.29□□□□□ -2.04
COPS2-204ENST00000558545 RMND1Q9NWS8 449 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 DDIT4Q9NX09 232 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 MARCOQ9UEW3 520 aaPredicted RBP2.29□□□□□ -2.04
COPS2-204ENST00000558545 NXT1Q9UKK6 140 aaKnown RBP2.29□□□□□ -2.04
COPS2-204ENST00000558545 S4R3C0 116 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 TICRRQ7Z2Z1 1910 aa2.29□□□□□ -2.04
COPS2-204ENST00000558545 TMEM131Q92545 1883 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 PPLO60437 1756 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 COL14A1Q05707 1796 aaKnown RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 SHANK3Q9BYB0 1731 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 FMN2Q9NZ56 1722 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 PARP4Q9UKK3 1724 aaKnown RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 E9PCH4 1651 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 QRICH2Q9H0J4 1663 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 LMTK2Q8IWU2 1503 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 DLC1Q96QB1 1528 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 DUOX2Q9NRD8 1548 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 RALGAPBQ86X10 1494 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 TMEM94Q12767 1356 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 GOLGA8QA0A0J9YX86 632 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 PRAMEF26H0Y7S4 382 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 NEMFO60524 1076 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 RLN2P04090 185 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 ZNF14P17017 642 aaPredicted RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 NELFEP18615 380 aaKnown RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 TSPAN5P62079 268 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 ANGPT1Q15389 498 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 GUSBP1Q15486 140 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 USF2Q15853 346 aaPredicted RBP2.28□□□□□ -2.04
COPS2-204ENST00000558545 PSG3Q16557 428 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 ATP6AP1LQ52LC2 224 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 MED27Q6P2C8 311 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 SYCE1Q8N0S2 351 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 SLC35G3Q8N808 338 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 APCDD1LQ8NCL9 501 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 CLHC1Q8NHS4 586 aa2.28□□□□□ -2.04
COPS2-204ENST00000558545 ZNF420Q8TAQ5 688 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms