RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 PRKACAP17612 351 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 ZBTB25P24278 435 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 UQCRFS1P47985 274 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF83P51522 516 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 TAS2R31P59538 309 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 ARPC4P59998 168 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.41
VPS33B-205ENST00000556096 MPPED2Q15777 294 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SRSF7Q16629 238 aaKnown RBP eCLIP12.52□□□□□ -0.41
VPS33B-205ENST00000556096 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 PEG10Q86TG7 708 aaKnown RBP12.52□□□□□ -0.41
VPS33B-205ENST00000556096 BATF2Q8N1L9 274 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 C12orf45Q8N5I9 185 aaPredicted RBP12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SPERTQ8NA61 448 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SCCPDHQ8NBX0 429 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 OR13G1Q8NGZ3 307 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 ZFAND1Q8TCF1 268 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 MARCH1Q8TCQ1 289 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 FN3KRPQ9HA64 309 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 JKAMPQ9P055 326 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SH3BGRL2Q9UJC5 107 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 SPEF1Q9Y4P9 236 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 NBASA2RRP1 2371 aa12.52□□□□□ -0.41
VPS33B-205ENST00000556096 EEF1E1-BLOC1S5C9J1V9 151 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-205ENST00000556096 RHBDL1O75783 438 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 FPR2P25090 351 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ECI1P42126 302 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ERVK11-1P61568 191 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF154Q13106 437 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 DHRS2Q13268 280 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 SURF2Q15527 256 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-205ENST00000556096 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 Q6ZS49 121 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 TMEM185AQ8NFB2 350 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
VPS33B-205ENST00000556096 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 CA10Q9NS85 328 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 PIPOXQ9P0Z9 390 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 RELNP78509 3460 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 M0R1B8 84 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 TIMM8AO60220 97 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-205ENST00000556096 CRYAAP02489 173 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 FABP6P51161 128 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 RAP2BP61225 183 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 RGS7BPQ6MZT1 257 aaPredicted RBP12.51□□□□□ -0.41
VPS33B-205ENST00000556096 C17orf107Q6ZR85 190 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ASB13Q8WXK3 278 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF488Q96MN9 340 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF286AQ9HBT8 521 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 NECAP2Q9NVZ3 263 aa12.51□□□□□ -0.41
VPS33B-205ENST00000556096 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 MCRIP1C9JLW8 97 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 H0YL77 283 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 MLNRO43193 412 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 NOS1APO75052 506 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-205ENST00000556096 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 PGA5P0DJD9 388 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF250P15622 560 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 GNLYP22749 145 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 NPY4RP50391 375 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 DHODHQ02127 395 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 IKZF1Q13422 519 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 DHRS11Q6UWP2 260 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 SSX8Q7RTT4 187 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 ADAD2Q8NCV1 583 aaKnown RBP12.5□□□□□ -0.41
VPS33B-205ENST00000556096 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 DYRK2Q92630 601 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 NRIP2Q9BQI9 281 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 RIMS4Q9H426 269 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-205ENST00000556096 DECR2Q9NUI1 292 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 IL36RNQ9UBH0 155 aa12.5□□□□□ -0.41
VPS33B-205ENST00000556096 C16orf97H3BN30 126 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 NAPSAO96009 420 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 HLA-AP01891 365 aaKnown RBP12.49□□□□□ -0.41
VPS33B-205ENST00000556096 OR5H8P0DN80 308 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 DNASE1P24855 282 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 GLRXP35754 106 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 NKX6-1P78426 367 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-205ENST00000556096 IFITM2Q01629 132 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 PPP1R1AQ13522 171 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 TMEM128Q5BJH2 165 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-205ENST00000556096 Q6ZR03 302 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-205ENST00000556096 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-205ENST00000556096 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 MITD1Q8WV92 249 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 DHRS9Q9BPW9 319 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 VKORC1Q9BQB6 163 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 TLNRD1Q9H1K6 362 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 C5orf66Q9H5L9 145 aa12.49□□□□□ -0.41
VPS33B-205ENST00000556096 FAM221AA4D161 298 aa12.48□□□□□ -0.41
VPS33B-205ENST00000556096 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
VPS33B-205ENST00000556096 OR5H14A6NHG9 310 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms