RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TMEM50BP56557 158 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 FGF12P61328 243 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 ASAH1Q13510 395 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 FAM209AQ5JX71 171 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 ZNF57Q68EA5 555 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-227ENST00000548080 Q6ZTK2 550 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 EGLN1Q9GZT9 426 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 TLNRD1Q9H1K6 362 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 ZMAT3Q9HA38 289 aaKnown RBP14.61□□□□□ -0.07
HDAC7-227ENST00000548080 SCPEP1Q9HB40 452 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 RBFOX1Q9NWB1 397 aaKnown RBP14.61□□□□□ -0.07
HDAC7-227ENST00000548080 ST3GAL6Q9Y274 331 aa14.61□□□□□ -0.07
HDAC7-227ENST00000548080 VWC2LB2RUY7 222 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 CDIPTO14735 213 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 PPIHO43447 177 aaKnown RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 ORC5O43913 435 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 CD55P08174 381 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 ACAA1P09110 424 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 GSTP1P09211 210 aaKnown RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 GNB3P16520 340 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 TNFSF4P23510 183 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 RBM11P57052 281 aaKnown RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 TAF9Q16594 264 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 PIGYQ3MUY2 71 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 NHLRC3Q5JS37 347 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 PLAC9Q5JTB6 97 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 AVPI1Q5T686 147 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 PRAMEF6Q5VXH4 476 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 Q71RC1 249 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 C11orf53Q8IXP5 236 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 BATF2Q8N1L9 274 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 GPX8Q8TED1 209 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 CCL17Q92583 94 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 SEH1LQ96EE3 360 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 ARHGAP5-AS1Q96IT6 56 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 MEGF10Q96KG7 1140 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 ZNF488Q96MN9 340 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 DIRC2Q96SL1 478 aa14.6□□□□□ -0.07
HDAC7-227ENST00000548080 MYOZ1Q9NP98 299 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 RBMX2Q9Y388 322 aaKnown RBP14.6□□□□□ -0.07
HDAC7-227ENST00000548080 TLN2Q9Y4G6 2542 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 IGHV4-61A0A0C4DH41 118 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 TMEM235A6NFC5 223 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 F8VVB4 439 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 F8VWA3 439 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 WNT9BO14905 357 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 PLA2G10O15496 165 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 PTBP3O95758 552 aaKnown RBP14.59□□□□□ -0.07
HDAC7-227ENST00000548080 PGA5P0DJD9 388 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 SLC25A16P16260 332 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 HIST1H1DP16402 221 aaKnown RBP14.59□□□□□ -0.07
HDAC7-227ENST00000548080 GDNFP39905 211 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 GUCA2AQ02747 115 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 ARL6IP1Q15041 203 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 PNLIPRP3Q17RR3 467 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 Q8IYB0 196 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 FAM58AQ8N1B3 248 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 CELF2-AS1Q8N7Q2 184 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 CHPT1Q8WUD6 406 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 PECRQ9BY49 303 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 CHODLQ9H9P2 273 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 MTFP1Q9UDX5 166 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 CSPG4Q6UVK1 2322 aa14.59□□□□□ -0.07
HDAC7-227ENST00000548080 FAM90A10PA6NDY2 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A18PA6NE21 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A16PA6NEW6 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A20PA6NIJ5 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A8PA6NJQ4 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A7PA6NKC0 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 A6NLC8 198 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A22PA8MWA6 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A12PA8MX19 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A5PA8MXJ8 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A23PA8MXZ1 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 MFNGO00587 321 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 GEMIN2O14893 280 aaKnown RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 NOS1APO75052 506 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 RBBP9O75884 186 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 LPLP06858 475 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A15PP0C7V4 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A13PP0C7W8 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A14PP0C7W9 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 FAM90A24PP0C7X0 464 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 GSTT2BP0CG30 244 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 PRKACAP17612 351 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 GIFP27352 417 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 GPR6P46095 362 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 SRP9P49458 86 aaKnown RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 ERVK11-1P61568 191 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 HOXA4Q00056 320 aaPredicted RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 SSBP1Q04837 148 aaKnown RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 MOGAT3Q86VF5 341 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 TOMM5Q8N4H5 51 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 EMG1Q92979 244 aaKnown RBP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 NEDD4LQ96PU5 975 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC7-227ENST00000548080 UFSP2Q9NUQ7 469 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 KLK11Q9UBX7 282 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 IL19Q9UHD0 177 aa14.58□□□□□ -0.08
HDAC7-227ENST00000548080 ELF5Q9UKW6 265 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms