RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CFHR1Q03591 330 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 AKR1C8PQ5T2L2 129 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 EMG1Q92979 244 aaKnown RBP12.77□□□□□ -0.36
HOXC11-202ENST00000546378 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.36
HOXC11-202ENST00000546378 RSG1Q9BU20 258 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 SLC2A9Q9NRM0 540 aa12.77□□□□□ -0.36
HOXC11-202ENST00000546378 ZNF816-ZNF321PA0A0X1KG74 233 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 LIPT2A6NK58 231 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ADAM20O43506 726 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 CD63P08962 238 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ALDH3B1P43353 468 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 CTAG1AP78358 180 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ZNF239Q16600 458 aaKnown RBP12.77□□□□□ -0.37
HOXC11-202ENST00000546378 PYY3Q5JQD4 70 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 OR8G2PQ6IF36 304 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 KCNS2Q9ULS6 477 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ST8SIA3O43173 380 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ZNF17P17021 662 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ATP6V0CP27449 155 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ADIRFQ15847 76 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 DNM1P46Q6ZS02 220 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 ALKBH4Q9NXW9 302 aa12.77□□□□□ -0.37
HOXC11-202ENST00000546378 EML6Q6ZMW3 1958 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 A0A087WZY1 265 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 C5orf52A6NGY3 159 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 MFNGO00587 321 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 GLB1P16278 677 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 SNCAP37840 140 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 NPBWR2P48146 333 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 ECH1Q13011 328 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 LTC4SQ16873 150 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 LGI3Q8N145 548 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 LYZL4Q96KX0 146 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 TP53RKQ96S44 253 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 LAMA5O15230 3695 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 F8VVB4 439 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 F8VWA3 439 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 HSPA12AO43301 675 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
HOXC11-202ENST00000546378 IGHV3-13P01766 116 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 AADACP22760 399 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 RPS23P62266 143 aaKnown RBP12.76□□□□□ -0.37
HOXC11-202ENST00000546378 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
HOXC11-202ENST00000546378 SSBP1Q04837 148 aaKnown RBP12.76□□□□□ -0.37
HOXC11-202ENST00000546378 PMS2CLQ68D20 193 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 ZNF429Q86V71 674 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 NOXO1Q8NFA2 376 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 PBDC1Q9BVG4 233 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 SLC35B3Q9H1N7 401 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 ANXA10Q9UJ72 324 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 DMXL2Q8TDJ6 3036 aa12.76□□□□□ -0.37
HOXC11-202ENST00000546378 ZFHX2Q9C0A1 2572 aaPredicted RBP12.76□□□□□ -0.37
HOXC11-202ENST00000546378 LILRA5A6NI73 299 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SCRG1O75711 98 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SNAPC5O75971 98 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 FSTP19883 344 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SPATA46Q5T0L3 261 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SLC23A3Q6PIS1 610 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 BTNL8Q6UX41 500 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 TMEM105Q8N8V8 129 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 CPNE4Q96A23 557 aaPredicted RBP12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SDSLQ96GA7 329 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 AQP10Q96PS8 301 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PCED1AQ9H1Q7 454 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 ZDHHC8Q9ULC8 765 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SRPK3Q9UPE1 567 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 CACNA1BQ00975 2339 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 CEBPZOSA8MTT3 80 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 FTCDNL1E5RQL4 147 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PPP1R2P9O14990 202 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 DEDDO75618 318 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 GSTP1P09211 210 aaKnown RBP12.75□□□□□ -0.37
HOXC11-202ENST00000546378 NKX2-1P43699 371 aaPredicted RBP12.75□□□□□ -0.37
HOXC11-202ENST00000546378 HAAOP46952 286 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 RHEBQ15382 184 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 ZNF600Q6ZNG1 722 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 OR1J1Q8NGS3 322 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PLK3Q9H4B4 646 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 GAR1Q9NY12 217 aaKnown RBP12.75□□□□□ -0.37
HOXC11-202ENST00000546378 B3GAT1Q9P2W7 334 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 A0A1B0GX78 115 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 CYTIPO60759 359 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SLC34A2O95436 690 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 EGR1P18146 543 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 DYNLT3P51808 116 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 QRFPP83859 136 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PMP22Q01453 160 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 C15orf54Q8N8G6 183 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PLPP5Q8NEB5 264 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 SMIM8Q96KF7 97 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 TMEM204Q9BSN7 226 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 DKKL1Q9UK85 242 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 WASF3Q9UPY6 502 aa12.75□□□□□ -0.37
HOXC11-202ENST00000546378 PIEZO2Q9H5I5 2752 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms