RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 IKZF5Q9H5V7 419 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF703Q9H7S9 590 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-219ENST00000542112 HINT3Q9NQE9 182 aaKnown RBP3.79□□□□□ -1.8
SNHG1-219ENST00000542112 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.79□□□□□ -1.8
SNHG1-219ENST00000542112 KCNIP1Q9NZI2 227 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 NUDT4Q9NZJ9 180 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 FLRT3Q9NZU0 649 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 PCTPQ9UKL6 214 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 ERG28Q9UKR5 140 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 FZD1Q9UP38 647 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 KCNK6Q9Y257 313 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 NOP16Q9Y3C1 178 aaKnown RBP3.79□□□□□ -1.8
SNHG1-219ENST00000542112 PTGDR2Q9Y5Y4 395 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 PLXNA1Q9UIW2 1896 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 ARID2Q68CP9 1835 aa3.79□□□□□ -1.8
SNHG1-219ENST00000542112 TRAV1-1A0A0B4J248 108 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 A0A1B0GTL3 188 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 EDDM13A0A1B0GTR0 161 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 A0A1W2PS29 197 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 GAGE10A6NGK3 116 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 IGLON5A6NGN9 336 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 OR51F1A6NGY5 319 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 DDTLA6NHG4 134 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 C9JVG2 144 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 C17orf112F2Z3M2 114 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 M0R1X1 148 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 GEMIN2O14893 280 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 AGPAT2O15120 278 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TMPRSS11DO60235 418 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 NPIPB7O75200 414 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 HYPMO75409 117 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SAP30O75446 220 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 PSMD10O75832 226 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 NRASP01111 189 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CGAP01215 116 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 PFN1P07737 140 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SRP19P09132 144 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 MYF5P13349 255 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 ELAVL4P26378 380 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 ADORA2BP29275 332 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 GDF5P43026 501 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 REG1BP48304 166 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SOX2P48431 317 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 FOXA1P55317 472 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SNU13P55769 128 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 MTCP1P56278 107 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TCL1AP56279 114 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 RPS14P62263 151 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 HIST1H1AQ02539 215 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF92Q03936 586 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CXCL9Q07325 125 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 PDGFRLQ15198 375 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 ADIRFQ15847 76 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TBR1Q16650 682 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SLC25A52Q3SY17 297 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SPANXN4Q5MJ08 99 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 FAM102AQ5T9C2 384 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 FCRL6Q6DN72 434 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 UFSP1Q6NVU6 142 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM184AQ6ZMB5 413 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 MEPCEQ7L2J0 689 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 H2BFWTQ7Z2G1 175 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CEACAM19Q7Z692 300 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 NR2C2APQ86WQ0 139 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 PLXDC1Q8IUK5 500 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 UEVLDQ8IX04 471 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 BOD1L2Q8IYS8 172 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SYS1Q8N2H4 156 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CSNK1A1LQ8N752 337 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 LRRC75AQ8NAA5 344 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 OR52B4Q8NGK2 314 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 OR4C16Q8NGL9 310 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 OR1N2Q8NGR9 330 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CMTM2Q8TAZ6 248 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 UBTD2Q8WUN7 234 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM45BQ96B21 275 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 LENG9Q96B70 501 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SLC25A38Q96DW6 304 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 PMCHL2Q9BQD1 86 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 QTRT1Q9BXR0 403 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CHST8Q9H2A9 424 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TM7SF3Q9NS93 570 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 TVP23BQ9NYZ1 205 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 FBXL17Q9UF56 701 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 HSF4Q9ULV5 492 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 YARS2Q9Y2Z4 477 aaKnown RBP3.78□□□□□ -1.8
SNHG1-219ENST00000542112 CSAG2Q9Y5P2 127 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 KAT6AQ92794 2004 aa3.78□□□□□ -1.8
SNHG1-219ENST00000542112 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.77□□□□□ -1.81
SNHG1-219ENST00000542112 TRBV2A0A0J9YWF9 115 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 SMIM35A0A1B0GVV1 85 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 hADV38S2A0JD32 116 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 LRP5LA4QPB2 252 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 PSMB11A5LHX3 300 aa3.77□□□□□ -1.81
SNHG1-219ENST00000542112 GAGE12HA6NDE8 117 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms