RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZNF674Q2M3X9 581 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 RHBDD2Q6NTF9 364 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 LIAT1Q6ZQX7 453 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 TMEM123Q8N131 208 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 UBALD1Q8TB05 177 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 NECAP2Q9NVZ3 263 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 KCNIP3Q9Y2W7 256 aa8.97□□□□□ -0.97
CDC42SE1-207ENST00000540998 DOCK10Q96BY6 2186 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 A0A0G2JMM0 328 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 A0A1W2PPB8 328 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 A0A1W2PRS3 328 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 KIR3DP1A8MWS1 328 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 H3BQ15 152 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 K7N7A8 449 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 DHHO43323 396 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 IGLV3-1P01715 115 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 S100A8P05109 93 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 KLK3P07288 261 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 EIF2S3P41091 472 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 GTF3C1Q12789 2109 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 DAZAP2Q15038 168 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 PPA1Q15181 289 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR2B11Q5JQS5 317 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 HIST2H3AQ71DI3 136 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 SYT13Q7L8C5 426 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 PIGCQ92535 297 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 SPACA9Q96E40 222 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 C18orf12Q96KH6 178 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 OR51M1Q9H341 326 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 ZNF442Q9H7R0 627 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 CRLF2Q9HC73 371 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 MTCH2Q9Y6C9 303 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 CHCHD2Q9Y6H1 151 aaPredicted RBP8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 NCOR1O75376 2440 aa8.96□□□□□ -0.97
CDC42SE1-207ENST00000540998 A0A1W2PR80 420 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ST8SIA3O43173 380 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 SEC11BP0C7V7 166 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 TAGLN2P37802 199 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF154Q13106 437 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 SURF2Q15527 256 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 SPSB3Q6PJ21 355 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR5C1Q8NGR4 320 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR1J1Q8NGS3 322 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 BOD1Q96IK1 185 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 PAPOLGQ9BWT3 736 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 METTL9Q9H1A3 318 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ARV1Q9H2C2 271 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 PLEKHA2Q9HB19 425 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 NCKAP5O14513 1909 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ADAMTS20P59510 1910 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 TRAV39A0A0B4J263 110 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 HSD17B6O14756 317 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ADAM20O43506 726 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZFAND5O76080 213 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 CCNOP22674 350 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 SUMO3P55854 103 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF92Q03936 586 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 YRDCQ86U90 279 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ODF3L1Q8IXM7 274 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZIC4Q8N9L1 334 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 OCIAD1Q9NX40 245 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 HSF4Q9ULV5 492 aa8.96□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZDBF2Q9HCK1 2354 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGKV1D-13A0A0B4J2D9 117 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 A0A0J9YW62 118 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 A0A1W2PQM1 296 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 PROB1E7EW31 1015 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGKV1-13P0DP09 117 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 GLB1P16278 677 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 SHBQ15464 509 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 TSC22D1Q15714 1073 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 RNF212Q495C1 297 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 HEPN1Q6WQI6 88 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 PP6455Q8WZ26 134 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 BORCS8Q96FH0 119 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 TAAR9Q96RI9 348 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPR61Q9BZJ8 451 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 SLC7A10Q9NS82 523 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 DOK5Q9P104 306 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 CXorf65A6NEN9 183 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 HLA-HP01893 362 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 SCTP09683 121 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF32P17041 273 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 DYNLT3P51808 116 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 FGF8P55075 233 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 DLK1P80370 383 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF383Q8NA42 475 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR10D4PQ8NGN7 298 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 SSX3Q99909 188 aa8.95□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGHV3-64DA0A0J9YX35 117 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 RBFOX3A6NFN3 312 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TLX3O43711 291 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 TRGC2P03986 189 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 ALDH3B1P43353 468 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 HTR5AP47898 357 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 CLEC12BQ2HXU8 276 aa8.94□□□□□ -0.98
CDC42SE1-207ENST00000540998 SLC25A26Q70HW3 274 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms