RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 OR56B2PQ8NGI1 322 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC37A2Q8TED4 501 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 PPP1R14AQ96A00 147 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 KIR3DX1Q9H7L2 352 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF430Q9H8G1 570 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 HSPB7Q9UBY9 170 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ADAM29Q9UKF5 820 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 SLC22A13Q9Y226 551 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CEP192Q8TEP8 1941 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 A0A1W2PR48 441 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF320A2RRD8 509 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 B4DGG1 531 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 XRCC2O43543 280 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 NUPR1O60356 82 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 LDB3O75112 727 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CSNK2A2P19784 350 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 PI4KAP42356 2102 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CNN1P51911 297 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 TRA2BP62995 288 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 RUNX2Q13950 521 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 Q5PR19 223 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 OR4D6Q8NGJ1 314 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 PTPMT1Q8WUK0 201 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 FAM46BQ96A09 425 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 PTX4Q96A99 478 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 SCGB3A2Q96PL1 93 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 AIF1LQ9BQI0 150 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 MAGT1Q9H0U3 335 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 ELL3Q9HB65 397 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 TUBG2Q9NRH3 451 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM106BQ9NUM4 274 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 C1orf123Q9NWV4 160 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 IL19Q9UHD0 177 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 DHDHQ9UQ10 334 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 HEBP2Q9Y5Z4 205 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 FANCMQ8IYD8 2048 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 SPEGQ15772 3267 aa8.28□□□□□ -1.08
CTNNA1-243ENST00000540387 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 A0A1B0GUS0 222 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 C17orf105B2RV13 164 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 PIAS2O75928 621 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 CFIP05156 583 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 JMJD7P0C870 316 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 ERGP11308 486 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 ZNF43P17038 809 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 RBMXP38159 391 aaKnown RBP8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 CDKN2AP42771 156 aaKnown RBP8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 ASCL1P50553 236 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 RAB28P51157 221 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 REEP5Q00765 189 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 PRDX4Q13162 271 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 CLEC12BQ2HXU8 276 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 DEFB133Q30KQ1 61 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 VAX1Q5SQQ9 334 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 GPR157Q5UAW9 335 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 CST9LP1Q5W188 147 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 DPY19L2P2Q6ZN68 376 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 C16orf82Q7Z2V1 217 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 TMEM123Q8N131 208 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 MRPL24Q96A35 216 aaKnown RBP8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 RPUSD4Q96CM3 377 aaKnown RBP8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 R4GN57 208 aa8.27□□□□□ -1.08
CTNNA1-243ENST00000540387 IGHV2OR16-5A0A0B4J2B6 119 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 A0A0B4J2E0 115 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 A0A1B0GWA3 101 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 A0A1B0GX12 115 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 FAM230AA0A1W2PPH8 454 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 A0A1W2PPV9 198 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 CTSVO60911 334 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 VAMP5O95183 116 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 IGFBP3P17936 291 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 PSMB5P28074 263 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 PTGER4P35408 488 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 ACAA2P42765 397 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 SHBQ15464 509 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 ARHGAP11BQ3KRB8 267 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 C1QL3Q5VWW1 255 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 MFSD12Q6NUT3 480 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 LRRC69Q6ZNQ3 347 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 OR51G1Q8NGK1 321 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 OR6N2Q8NGY6 317 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 OR13G1Q8NGZ3 307 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 ADOQ96SZ5 270 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 AMELYQ99218 206 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 SDF2Q99470 211 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 COL25A1Q9BXS0 654 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 TAC3Q9UHF0 121 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 LAMTOR2Q9Y2Q5 125 aa8.27□□□□□ -1.09
CTNNA1-243ENST00000540387 KIR2DS5A0A0G2JLQ3 304 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 A0A0G2JNG1 304 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 LMO7DNF2Z398 122 aa8.26□□□□□ -1.09
CTNNA1-243ENST00000540387 KIR2DS3K7RE56 304 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms