RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 CD14P08571 375 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 IL2RGP31785 369 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 LTBRP36941 435 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 SERF2P84101 59 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 ZNF141Q15928 474 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 GLYATL3Q5SZD4 288 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 TMEM164Q5U3C3 297 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 RNASEKQ6P5S7 137 aaKnown RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 PLXDC2Q6UX71 529 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 GDF7Q7Z4P5 450 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 H1FOOQ8IZA3 346 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 OR10P1Q8NGE3 313 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 MBD3L1Q8WWY6 194 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 OR10A2Q9H208 303 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CALHM2Q9HA72 323 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CDH20Q9HBT6 801 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 C19orf25Q9UFG5 118 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CGGBP1Q9UFW8 167 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 KLF2Q9Y5W3 355 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 A0A087WUU8 490 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 A0A1W2PN81 502 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 RBFOX3A6NFN3 312 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CD38P28907 300 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 DHRS2Q13268 280 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 PRICKLE4Q2TBC4 344 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 LINC01559Q495D7 138 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 MEGF9Q9H1U4 602 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 OBP2BQ9NPH6 170 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 PRTFDC1Q9NRG1 225 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CLDN16Q9Y5I7 305 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CACNA1IQ9P0X4 2223 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CLEC18AA5D8T8 446 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 METTL12A8MUP2 240 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CTSVO60911 334 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 EFNB1P98172 346 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 FOXK2Q01167 660 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 BSXQ3C1V8 233 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 DCAF12L2Q5VW00 463 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 TMEM183AQ8IXX5 376 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 MUC15Q8N387 334 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 CLEC18CQ8NCF0 446 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 OR4S1Q8NGB4 309 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 MOB3AQ96BX8 217 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 DDIT4LQ96D03 193 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 ARSGQ96EG1 525 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 BORCS8Q96FH0 119 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 FAAP24Q9BTP7 215 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 TMEM208Q9BTX3 173 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 LRP4O75096 1905 aa5.38□□□□□ -1.55
PTPRD-214ENST00000540109 C4orf51C9J302 202 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 VENTXO95231 258 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 SYNGR4O95473 234 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 CD8AP01732 235 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 MELTFP08582 738 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 EPHA8P29322 1005 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 GPR3P46089 330 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 CTXN1P60606 82 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 FAM69BQ5VUD6 431 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 DHRS11Q6UWP2 260 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 C17orf82Q86X59 251 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 IMMP2LQ96T52 175 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 TEAD3Q99594 435 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 HSPB9Q9BQS6 159 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 C6orf106Q9H6K1 298 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 TMEM242Q9NWH2 141 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 WNT16Q9UBV4 365 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 ING1Q9UK53 422 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 ZMIZ1Q9ULJ6 1067 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 PDE6DO43924 150 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 CA11O75493 328 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 FUT1P19526 365 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 PLP2Q04941 152 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 TRA2AQ13595 282 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 PWWP2BQ6NUJ5 590 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 SRD5A3Q9H8P0 318 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 RCC2Q9P258 522 aaKnown RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 TRAPPC2LH3BP13 241 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 FCN1O00602 326 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 ALOX5APP20292 161 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 RAB32Q13637 225 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 KLF9Q13886 244 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 DUSP5Q16690 384 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 NIT1Q86X76 327 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 FAM71F1Q96KD3 344 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 MRGPRX4Q96LA9 322 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 SDHCQ99643 169 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 P4HTMQ9NXG6 502 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 PTRH2Q9Y3E5 179 aaKnown RBP5.37□□□□□ -1.55
PTPRD-214ENST00000540109 LOC102723971A0A1B0GUV8 181 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 SERTM2A0A1B0GWG4 89 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 C4orf47A7E2U8 309 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 H3BMH7 237 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 RHBDL1O75783 438 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 C1QCP02747 245 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
PTPRD-214ENST00000540109 CRISP2P16562 243 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms