RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ZNF691Q5VV52 312 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 ASPHD2Q6ICH7 369 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 CCDC144NLQ6NUI1 221 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 HEPN1Q6WQI6 88 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 FGFRL1Q8N441 504 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 ASCC1Q8N9N2 400 aaKnown RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 CFHR4Q92496 578 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 SLAMF9Q96A28 289 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 C4orf36Q96KX1 117 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 TMEM133Q9H2Q1 129 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 LIN7BQ9HAP6 207 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 OR14J1Q9UGF5 321 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 DHDHQ9UQ10 334 aa8.44□□□□□ -1.06
CSDE1-217ENST00000534699 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
CSDE1-217ENST00000534699 IGKV1-9A0A0C4DH69 117 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 TMEM82A0PJX8 343 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 J3QLW9 94 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 M0QZK8 103 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 M0R129 80 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 GLAP06280 429 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF19P17023 458 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 RAB3AP20336 220 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 BRS3P32247 399 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 PRRX1P54821 245 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 ELF3P78545 371 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 GRK1Q15835 563 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 ANGPTL5Q86XS5 388 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 TRMT10AQ8TBZ6 339 aaKnown RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 GPR148Q8TDV2 347 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 STMN2Q93045 179 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF649Q9BS31 505 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 PRSS22Q9GZN4 317 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 CNOT2Q9NZN8 540 aaKnown RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 DIMT1Q9UNQ2 313 aaKnown RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 MYRFQ9Y2G1 1151 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 MEGF11A6BM72 1044 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A22PA8MWA6 464 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 H3BUX3 64 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 HOXA4Q00056 320 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 EMX1Q04741 257 aaPredicted RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 KLRD1Q13241 179 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF273Q14593 569 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 RNLSQ5VYX0 342 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 Q6ZTK2 550 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 PNKDQ8N490 385 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 C8orf31Q8N9H6 132 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 OR52I1Q8NGK6 324 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 MRPS24Q96EL2 167 aaKnown RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 TTTY10Q9BZA0 68 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 PLCXD1Q9NUJ7 323 aa8.43□□□□□ -1.06
CSDE1-217ENST00000534699 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
CSDE1-217ENST00000534699 OR3A1P47881 315 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 ZP1P60852 638 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 ZNF488Q96MN9 340 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 DNHD1Q96M86 4753 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 ANK2Q01484 3957 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A10PA6NDY2 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A18PA6NE21 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A16PA6NEW6 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A20PA6NIJ5 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A7PA6NKC0 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A12PA8MX19 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A5PA8MXJ8 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A23PA8MXZ1 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 LEUTXA8MZ59 168 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 MAGEB4O15481 346 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-217ENST00000534699 ARG1P05089 322 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A15PP0C7V4 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A13PP0C7W8 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A14PP0C7W9 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 FAM90A24PP0C7X0 464 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 PRKACAP17612 351 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 BCL3P20749 454 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 HTR1DP28221 377 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 NANOS3P60323 173 aaKnown RBP8.42□□□□□ -1.06
CSDE1-217ENST00000534699 GMFBP60983 142 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 SLC34A1Q06495 639 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 MPV17LQ2QL34 196 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 OR52M1Q8NGK5 317 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 ELL3Q9HB65 397 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-217ENST00000534699 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
CSDE1-217ENST00000534699 EFCAB10A6NFE3 127 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 MYL12AP19105 171 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 FSTP19883 344 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 Q6P435 159 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 TRAT1Q6PIZ9 186 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 OR4D6Q8NGJ1 314 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 OR51A2Q8NGJ7 313 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 SPACA1Q9HBV2 294 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 TET2Q6N021 2002 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-217ENST00000534699 IGHV2-26A0A0B4J1V2 119 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 H0YJX3 145 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 CA11O75493 328 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 OR2H2O95918 312 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 GABRR1P24046 479 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 PTGFRP43088 359 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 EDDM3BP56851 147 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 CDK5R1Q15078 307 aa8.41□□□□□ -1.06
CSDE1-217ENST00000534699 KISS1Q15726 138 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms