RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 Q8N402 240 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TEX9Q8N6V9 391 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TRIML2Q8N7C3 387 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TMEM99Q8N816 258 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TCEANCQ8N8B7 351 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 C8orf31Q8N9H6 132 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OR13D1Q8NGV5 346 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 KIR2DL5BQ8NHK3 375 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF563Q8TA94 476 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 APOBEC3DQ96AK3 386 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 EXOSC8Q96B26 276 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 TESCQ96BS2 214 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PPCDCQ96CD2 204 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ASB9Q96DX5 294 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 L3HYPDHQ96EM0 354 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SDSLQ96GA7 329 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SH3YL1Q96HL8 342 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 RBM14Q96PK6 669 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 FEVQ99581 238 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SDHCQ99643 169 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 COQ7Q99807 217 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ECSITQ9BQ95 431 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 MRPL57Q9BQC6 102 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 ST6GALNAC5Q9BVH7 336 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ACPTQ9BZG2 426 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OR2H1Q9GZK4 316 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 OR2J1Q9GZK6 312 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HDHD2Q9H0R4 259 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TSPYL1Q9H0U9 437 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 DPH5Q9H2P9 285 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 NCOR1P1Q9H4R4 102 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 RGCCQ9H4X1 137 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 FNDC4Q9H6D8 234 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 C10orf88Q9H8K7 445 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ANKZF1Q9H8Y5 726 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 BCL2L10Q9HD36 194 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 LZTFL1Q9NQ48 299 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 PFDN4Q9NQP4 134 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZC4H2Q9NQZ6 224 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 NANSQ9NR45 359 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZCCHC3Q9NUD5 404 aaKnown RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 RASL12Q9NYN1 266 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 USE1Q9NZ43 259 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 TXNDC16Q9P2K2 825 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 P2RX2Q9UBL9 471 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 CD300AQ9UGN4 299 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ENPP5Q9UJA9 477 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF229Q9UJW7 825 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HHLA2Q9UM44 414 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 SPATA2Q9UM82 520 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 GUCA1BQ9UMX6 200 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 ZNF443Q9Y2A4 671 aaPredicted RBP1.08□□□□□ -2.24
CD44-212ENST00000524922 WDR45Q9Y484 360 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 CCL27Q9Y4X3 112 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 COMMD3-BMI1R4GMX3 469 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 HSPE1-MOB4S4R3N1 261 aa1.08□□□□□ -2.24
CD44-212ENST00000524922 FAT3Q8TDW7 4589 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 TNCP24821 2201 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 LRP1Q07954 4544 aaKnown RBP1.07□□□□□ -2.24
CD44-212ENST00000524922 A0A0B4J2E0 115 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 EXOC1LA0A1B0GW35 172 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 A0A1B0GX12 115 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 SH3PXD2BA1X283 911 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 PRSS37A4D1T9 235 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 PRORSD1PA6NEY8 169 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 A6NIZ1 184 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 CLDN24A6NM45 220 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 C12orf71A8MTZ7 269 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 I3L521 148 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 PLPP3O14495 311 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 DNALI1O14645 258 aaPredicted RBP1.07□□□□□ -2.24
CD44-212ENST00000524922 NDUFB3O43676 98 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 TYROBPO43914 113 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 GMFGO60234 142 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 OR10H3O60404 316 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 NOS1APO75052 506 aaPredicted RBP1.07□□□□□ -2.24
CD44-212ENST00000524922 TSC22D2O75157 780 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 SMIM24O75264 130 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ZNF253O75346 499 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 RHBDL1O75783 438 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 LY6G6CO95867 125 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 OXTP01178 125 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 C1QBP02746 253 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 MT-ND1P03886 318 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 CD74P04233 296 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 SERPINE1P05121 402 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 GSTA1P08263 222 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 FGF4P08620 206 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ASAH2BP0C7U1 165 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 UBTFL6P0CB48 400 aaPredicted RBP1.07□□□□□ -2.24
CD44-212ENST00000524922 ZCCHC18P0CG32 403 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 P0DMU3 169 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 FAM231AP0DMU4 169 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 FAM231CP0DMU5 169 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 THRBP10828 461 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 CD79AP11912 226 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 GFAPP14136 432 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 NCK1P16333 377 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 ELK1P19419 428 aa1.07□□□□□ -2.24
CD44-212ENST00000524922 TCN1P20061 433 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms