RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 COX19Q49B96 90 aa2.58□□□□□ -2
SQLE-204ENST00000520493 ACTBL2Q562R1 376 aa2.58□□□□□ -2
SQLE-204ENST00000520493 YIF1BQ5BJH7 314 aa2.58□□□□□ -2
SQLE-204ENST00000520493 PDZD11Q5EBL8 140 aa2.58□□□□□ -2
SQLE-204ENST00000520493 RNASE13Q5GAN3 156 aaKnown RBP2.58□□□□□ -2
SQLE-204ENST00000520493 DNM1P34Q6PK57 102 aa2.58□□□□□ -2
SQLE-204ENST00000520493 FAM231DQ6ZW35 169 aa2.58□□□□□ -2
SQLE-204ENST00000520493 ENTHD1Q8IYW4 607 aa2.58□□□□□ -2
SQLE-204ENST00000520493 SAXO1Q8IYX7 474 aa2.58□□□□□ -2
SQLE-204ENST00000520493 SLC25A29Q8N8R3 303 aa2.58□□□□□ -2
SQLE-204ENST00000520493 OR5M1Q8NGP8 315 aa2.58□□□□□ -2
SQLE-204ENST00000520493 STOML3Q8TAV4 291 aa2.58□□□□□ -2
SQLE-204ENST00000520493 C22orf15Q8WYQ4 148 aa2.58□□□□□ -2
SQLE-204ENST00000520493 NEURL3Q96EH8 262 aa2.58□□□□□ -2
SQLE-204ENST00000520493 MBOAT7Q96N66 472 aa2.58□□□□□ -2
SQLE-204ENST00000520493 CHCHD7Q9BUK0 85 aa2.58□□□□□ -2
SQLE-204ENST00000520493 NUDT9Q9BW91 350 aa2.58□□□□□ -2
SQLE-204ENST00000520493 TAPBPLQ9BX59 468 aa2.58□□□□□ -2
SQLE-204ENST00000520493 TBL1XR1Q9BZK7 514 aa2.58□□□□□ -2
SQLE-204ENST00000520493 FBXO6Q9NRD1 293 aaPredicted RBP2.58□□□□□ -2
SQLE-204ENST00000520493 IL20Q9NYY1 176 aa2.58□□□□□ -2
SQLE-204ENST00000520493 RAB26Q9ULW5 256 aa2.58□□□□□ -2
SQLE-204ENST00000520493 TP53TG1Q9Y2A0 90 aa2.58□□□□□ -2
SQLE-204ENST00000520493 KLF13Q9Y2Y9 288 aaPredicted RBP2.58□□□□□ -2
SQLE-204ENST00000520493 TSPOAP1O95153 1857 aa2.58□□□□□ -2
SQLE-204ENST00000520493 PTPRTO14522 1441 aa2.58□□□□□ -2
SQLE-204ENST00000520493 A0A0C4DFX4 3053 aa2.57□□□□□ -2
SQLE-204ENST00000520493 TRAV8-2A0A0B4J237 113 aa2.57□□□□□ -2
SQLE-204ENST00000520493 A0A0G2JMP0 313 aa2.57□□□□□ -2
SQLE-204ENST00000520493 A0A0X1KG70 313 aa2.57□□□□□ -2
SQLE-204ENST00000520493 MYBPHLA2RUH7 354 aa2.57□□□□□ -2
SQLE-204ENST00000520493 FAM183AA6NL82 134 aa2.57□□□□□ -2
SQLE-204ENST00000520493 CD300LBA8K4G0 201 aa2.57□□□□□ -2
SQLE-204ENST00000520493 EFCAB9A8MZ26 197 aa2.57□□□□□ -2
SQLE-204ENST00000520493 GPR171O14626 319 aa2.57□□□□□ -2
SQLE-204ENST00000520493 SOX14O95416 240 aa2.57□□□□□ -2
SQLE-204ENST00000520493 CTDNEP1O95476 244 aa2.57□□□□□ -2
SQLE-204ENST00000520493 ATP6V1G2O95670 118 aa2.57□□□□□ -2
SQLE-204ENST00000520493 ELK4P28324 431 aa2.57□□□□□ -2
SQLE-204ENST00000520493 HAAOP46952 286 aa2.57□□□□□ -2
SQLE-204ENST00000520493 SYCNQ0VAF6 134 aa2.57□□□□□ -2
SQLE-204ENST00000520493 FADDQ13158 208 aa2.57□□□□□ -2
SQLE-204ENST00000520493 SNRNP35Q16560 246 aaKnown RBP2.57□□□□□ -2
SQLE-204ENST00000520493 TEX30Q5JUR7 227 aa2.57□□□□□ -2
SQLE-204ENST00000520493 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
SQLE-204ENST00000520493 DGAT2L6Q6ZPD8 337 aa2.57□□□□□ -2
SQLE-204ENST00000520493 WDR86Q86TI4 376 aa2.57□□□□□ -2
SQLE-204ENST00000520493 Q8N402 240 aa2.57□□□□□ -2
SQLE-204ENST00000520493 ZNF645Q8N7E2 425 aa2.57□□□□□ -2
SQLE-204ENST00000520493 Q8N9L7 120 aa2.57□□□□□ -2
SQLE-204ENST00000520493 DTD1Q8TEA8 209 aa2.57□□□□□ -2
SQLE-204ENST00000520493 SMIM12Q96EX1 92 aa2.57□□□□□ -2
SQLE-204ENST00000520493 FMC1Q96HJ9 113 aa2.57□□□□□ -2
SQLE-204ENST00000520493 SLC19A3Q9BZV2 496 aa2.57□□□□□ -2
SQLE-204ENST00000520493 ASB7Q9H672 318 aa2.57□□□□□ -2
SQLE-204ENST00000520493 TBX21Q9UL17 535 aa2.57□□□□□ -2
SQLE-204ENST00000520493 NEU3Q9UQ49 428 aa2.57□□□□□ -2
SQLE-204ENST00000520493 POLR3HQ9Y535 204 aaPredicted RBP2.57□□□□□ -2
SQLE-204ENST00000520493 AHDC1Q5TGY3 1603 aaPredicted RBP2.57□□□□□ -2
SQLE-204ENST00000520493 USP24Q9UPU5 2620 aa2.56□□□□□ -2
SQLE-204ENST00000520493 IGKV6-21A0A0C4DH24 114 aa2.56□□□□□ -2
SQLE-204ENST00000520493 F5H768 121 aa2.56□□□□□ -2
SQLE-204ENST00000520493 TMX2-CTNND1H3BSU7 103 aa2.56□□□□□ -2
SQLE-204ENST00000520493 FFAR1O14842 300 aa2.56□□□□□ -2
SQLE-204ENST00000520493 BIRC5O15392 142 aa2.56□□□□□ -2
SQLE-204ENST00000520493 GYG2O15488 501 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ZW10O43264 779 aa2.56□□□□□ -2
SQLE-204ENST00000520493 SCO1O75880 301 aa2.56□□□□□ -2
SQLE-204ENST00000520493 DHRS3O75911 302 aa2.56□□□□□ -2
SQLE-204ENST00000520493 CA2P00918 260 aa2.56□□□□□ -2
SQLE-204ENST00000520493 IGKV3-11P04433 115 aa2.56□□□□□ -2
SQLE-204ENST00000520493 OR56A5P0C7T3 313 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ZNF823P16415 610 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ME2P23368 584 aa2.56□□□□□ -2
SQLE-204ENST00000520493 PRTN3P24158 256 aa2.56□□□□□ -2
SQLE-204ENST00000520493 KIR3DL2P43630 455 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ACOT2P49753 483 aa2.56□□□□□ -2
SQLE-204ENST00000520493 CLDN12P56749 244 aa2.56□□□□□ -2
SQLE-204ENST00000520493 IMPG1Q17R60 797 aa2.56□□□□□ -2
SQLE-204ENST00000520493 DEFB116Q30KQ4 102 aa2.56□□□□□ -2
SQLE-204ENST00000520493 OGFRL1Q5TC84 451 aaPredicted RBP2.56□□□□□ -2
SQLE-204ENST00000520493 AP1ARQ63HQ0 302 aa2.56□□□□□ -2
SQLE-204ENST00000520493 GLYATQ6IB77 296 aa2.56□□□□□ -2
SQLE-204ENST00000520493 C8orf74Q6P047 294 aa2.56□□□□□ -2
SQLE-204ENST00000520493 FAM19A5Q7Z5A7 132 aaPredicted RBP2.56□□□□□ -2
SQLE-204ENST00000520493 MTERF4Q7Z6M4 381 aaKnown RBP2.56□□□□□ -2
SQLE-204ENST00000520493 TMEM256Q8N2U0 113 aa2.56□□□□□ -2
SQLE-204ENST00000520493 TTLQ8NG68 377 aa2.56□□□□□ -2
SQLE-204ENST00000520493 CASTOR1Q8WTX7 329 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ITFG2Q969R8 447 aa2.56□□□□□ -2
SQLE-204ENST00000520493 KCTD7Q96MP8 289 aa2.56□□□□□ -2
SQLE-204ENST00000520493 FOPNLQ96NB1 174 aa2.56□□□□□ -2
SQLE-204ENST00000520493 PARD6GQ9BYG4 376 aaPredicted RBP2.56□□□□□ -2
SQLE-204ENST00000520493 SLC22A4Q9H015 551 aa2.56□□□□□ -2
SQLE-204ENST00000520493 ARL6Q9H0F7 186 aa2.56□□□□□ -2
SQLE-204ENST00000520493 METTL9Q9H1A3 318 aa2.56□□□□□ -2
SQLE-204ENST00000520493 PSTPIP2Q9H939 334 aa2.56□□□□□ -2
SQLE-204ENST00000520493 BABAM2Q9NXR7 383 aa2.56□□□□□ -2
SQLE-204ENST00000520493 HMGXB4Q9UGU5 601 aa2.56□□□□□ -2
SQLE-204ENST00000520493 FARSAQ9Y285 508 aaKnown RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms