RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 OMPP47874 163 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 BLVRAP53004 296 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 GMFBP60983 142 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 RPS7P62081 194 aaKnown RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ACTA2P62736 377 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ACTG2P63267 376 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ACTC1P68032 377 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ACTA1P68133 377 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 HIST1H3AP68431 136 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 CBX1P83916 185 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 BDH1Q02338 343 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF92Q03936 586 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 MALLQ13021 153 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 DYNC1I2Q13409 638 aaKnown RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 IL18R1Q13478 541 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 TAF13Q15543 124 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 DEFB135Q30KP9 77 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 SOHLH1Q5JUK2 328 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 LCE2DQ5TA82 110 aaPredicted RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 HIST2H3PS2Q5TEC6 136 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 PVRIGQ6DKI7 326 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 RASSF6Q6ZTQ3 369 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 Q6ZWC4 215 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 HIST2H3AQ71DI3 136 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF367Q7RTV3 350 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 FAM122BQ7Z309 247 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 THNSL2Q86YJ6 484 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 C10orf67Q8IYJ2 551 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 FTMTQ8N4E7 242 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 CD177Q8N6Q3 437 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 Q8N9W7 124 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 TMEM185AQ8NFB2 350 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 OR4K13Q8NH42 304 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 UBALD1Q8TB05 177 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 GIPC3Q8TF64 312 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 STMN2Q93045 179 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 SPTSSAQ969W0 71 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 SLCO4A1Q96BD0 722 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 OTULINQ96BN8 352 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 Q96M85 177 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 KCTD7Q96MP8 289 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 COQ7Q99807 217 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 BTBD10Q9BSF8 475 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 COPS4Q9BT78 406 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 RSRP1Q9BUV0 290 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 GGTLC1Q9BX51 225 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 TSSK6Q9BXA6 273 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ABCG5Q9H222 651 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 OPA3Q9H6K4 179 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 SP140LQ9H930 580 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 NRIP3Q9NQ35 241 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 RPRD1BQ9NQG5 326 aaKnown RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 PAPOLBQ9NRJ5 636 aaKnown RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 PLSCR3Q9NRY6 295 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 MBNL3Q9NUK0 354 aaKnown RBP2.45□□□□□ -2.02
TCOF1-208ENST00000506063 ARMC1Q9NVT9 282 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 DPM3Q9P2X0 92 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 NLKQ9UBE8 527 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 CD300AQ9UGN4 299 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 SIGLEC7Q9Y286 467 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 IER3IP1Q9Y5U9 82 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 WSB1Q9Y6I7 421 aa2.45□□□□□ -2.02
TCOF1-208ENST00000506063 A0A0G2JLM5 398 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 hCG_1809904A0A1W2PP81 198 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 A0A1W2PPE2 198 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 A0A1W2PR64 198 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 A0A1W2PRV1 198 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 TCRBV5S2A0A599 114 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 H3BUI4 141 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 M0R135 149 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 EBAG9O00559 213 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 ARPC3O15145 178 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 PRODHO43272 600 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 AKR7A2O43488 359 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 SOX15O60248 233 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 PTP4A3O75365 173 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 MTRF1O75570 445 aaKnown RBP2.44□□□□□ -2.02
TCOF1-208ENST00000506063 TXNDC12O95881 172 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 APOC1P02654 83 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 AMBPP02760 352 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 IFNA4P05014 189 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 HMGN1P05114 100 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 LGALS1P09382 135 aaKnown RBP2.44□□□□□ -2.02
TCOF1-208ENST00000506063 ZNF728P0DKX0 622 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 MT1HL1P0DM35 61 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 P0DMU3 169 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 FAM231AP0DMU4 169 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 FAM231CP0DMU5 169 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 ANXA8P13928 327 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 HIST1H1CP16403 213 aaKnown RBP2.44□□□□□ -2.02
TCOF1-208ENST00000506063 CFL1P23528 166 aaKnown RBP2.44□□□□□ -2.02
TCOF1-208ENST00000506063 FMO3P31513 532 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 GRK5P34947 590 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 SLC15A1P46059 708 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 GSSP48637 474 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 RAB9AP51151 201 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 TPTEP56180 551 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 KRTAP10-4P60372 401 aaPredicted RBP2.44□□□□□ -2.02
TCOF1-208ENST00000506063 ZP1P60852 638 aa2.44□□□□□ -2.02
TCOF1-208ENST00000506063 LSM6P62312 80 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms