RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 HOXC4P09017 264 aaPredicted RBP13.34□□□□□ -0.27
C4A-259ENST00000498271 CD82P27701 267 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 ASCL1P50553 236 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 HLA-BQ31612 363 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 NHLRC3Q5JS37 347 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 PDCD6O75340 191 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 ZNF253O75346 499 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 COL19A1Q14993 1142 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 MRGPREQ86SM8 312 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
C4A-259ENST00000498271 OR4C3Q8NH37 302 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 TSPAN32Q96QS1 320 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 YBX2Q9Y2T7 364 aaKnown RBP13.34□□□□□ -0.27
C4A-259ENST00000498271 A0A1W2PNR3 127 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 SPRY1O43609 319 aaPredicted RBP13.34□□□□□ -0.27
C4A-259ENST00000498271 SEMA7AO75326 666 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
C4A-259ENST00000498271 DYNLT3P51808 116 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 LINC00696Q6ZRV3 163 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 MCHR2Q969V1 340 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 ZNF835Q9Y2P0 537 aa13.34□□□□□ -0.27
C4A-259ENST00000498271 LOC105371267A0A1B0GV96 52 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 M0R2Z0 102 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 TCF21O43680 179 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 C1QCP02747 245 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 PGA4P0DJD7 388 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 PGA5P0DJD9 388 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 ZNF141Q15928 474 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 FUT9Q9Y231 359 aa13.33□□□□□ -0.27
C4A-259ENST00000498271 FGF2P09038 288 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 EDN3P14138 238 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 CDKN2AP42771 156 aaKnown RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 RNF2Q99496 336 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 ATG101Q9BSB4 218 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 TDRD15B5MCY1 1934 aaKnown RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 CXorf65A6NEN9 183 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 GEMIN2O14893 280 aaKnown RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 GYPAP02724 150 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 POU2F2P09086 479 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 DEFB109BQ30KR1 87 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 ZNF343Q6P1L6 599 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 C20orf196Q8IYI0 205 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 FAM181AQ8N9Y4 354 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 TMEM167BQ9NRX6 74 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 PIAS2O75928 621 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 YIF1AO95070 293 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 MUC1P15941 1255 aaPredicted RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 LGALS4P56470 323 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 GABRG3Q99928 467 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 ADAT1Q9BUB4 502 aaKnown RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 PECRQ9BY49 303 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 TRIP6Q15654 476 aaKnown RBP13.33□□□□□ -0.28
C4A-259ENST00000498271 TMEM92Q6UXU6 159 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
C4A-259ENST00000498271 A0A1W2PPV9 198 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 GREM1O60565 184 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 ZGLP1P0C6A0 271 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 VDAC1P21796 283 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 DHRS11Q6UWP2 260 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 MS4A3Q96HJ5 214 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 LANCL2Q9NS86 450 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 ANXA10Q9UJ72 324 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 TIMM9Q9Y5J7 89 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 OR5AL1P0C617 328 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 SCGB1C2P0DMR2 95 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 RPL24P83731 157 aaKnown RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 TEX29Q8N6K0 151 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 PTPRFP10586 1907 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 C5orf49A4QMS7 147 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 CDX1P47902 265 aaPredicted RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 METTL1Q9UBP6 276 aaKnown RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 BMPR1BO00238 502 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 DLL1O00548 723 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 CYB5R3P00387 301 aaPredicted RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 ZNF816Q0VGE8 651 aaPredicted RBP13.32□□□□□ -0.28
C4A-259ENST00000498271 TRAT1Q6PIZ9 186 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 BATF2Q8N1L9 274 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 ACY3Q96HD9 319 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 SLC25A22Q9H936 323 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
C4A-259ENST00000498271 HOXD4P09016 255 aaPredicted RBP13.31□□□□□ -0.28
C4A-259ENST00000498271 CT62P0C5K7 136 aa13.31□□□□□ -0.28
C4A-259ENST00000498271 HOXA6P31267 233 aa13.31□□□□□ -0.28
C4A-259ENST00000498271 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
C4A-259ENST00000498271 K7EQS6 105 aa13.31□□□□□ -0.28
C4A-259ENST00000498271 EIF3GO75821 320 aaKnown RBP eCLIP13.31□□□□□ -0.28
C4A-259ENST00000498271 CNIH1O95406 144 aa13.31□□□□□ -0.28
C4A-259ENST00000498271 SRP14P37108 136 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms