RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 TCF7L1Q9HCS4 588 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 EXOSC4Q9NPD3 245 aaKnown RBP12.61□□□□□ -0.39
NUP50-219ENST00000497960 SIRT7Q9NRC8 400 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
NUP50-219ENST00000497960 M0R1W7 72 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 PIN1P1O15428 100 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 ARL6IP5O75915 188 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 ALX3O95076 343 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 CYB5AP00167 134 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 MAS1P04201 325 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
NUP50-219ENST00000497960 PRDX2P32119 198 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 TGFBR2P37173 567 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 IL24Q13007 206 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 ZNF529Q6P280 563 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
NUP50-219ENST00000497960 C1orf122Q6ZSJ8 110 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 SATL1Q86VE3 508 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 CALHM1Q8IU99 346 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 TMEM86BQ8N661 226 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 FAM192AQ9GZU8 254 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
NUP50-219ENST00000497960 ELL3Q9HB65 397 aaPredicted RBP12.6□□□□□ -0.39
NUP50-219ENST00000497960 TMEM138Q9NPI0 162 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 TNFRSF19Q9NS68 423 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 STUB1Q9UNE7 303 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 FAM96BQ9Y3D0 163 aa12.6□□□□□ -0.39
NUP50-219ENST00000497960 CRYBA1P05813 215 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 MELTFP08582 738 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 UCHL1P09936 223 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 CD36P16671 472 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 CALRP27797 417 aaKnown RBP12.59□□□□□ -0.39
NUP50-219ENST00000497960 NCR3LG1Q68D85 454 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 UNQ9370/PRO34162Q6UXP9 181 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 TMEM91Q6ZNR0 172 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 SLC25A26Q70HW3 274 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 NKAIN3Q8N8D7 197 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 OR52N4Q8NGI2 321 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 SSMEM1Q8WWF3 244 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 SLAMF9Q96A28 289 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 OR14J1Q9UGF5 321 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 POMT1Q9Y6A1 747 aa12.59□□□□□ -0.39
NUP50-219ENST00000497960 A0A0U1RQK1 487 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PPH5 198 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 SPRY1O43609 319 aaPredicted RBP12.58□□□□□ -0.4
NUP50-219ENST00000497960 GPX5O75715 221 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 KNG1P01042 644 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 JUNBP17275 347 aaPredicted RBP12.58□□□□□ -0.4
NUP50-219ENST00000497960 MYL9P24844 172 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 KISS1Q15726 138 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 MKXQ8IYA7 352 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 JAGN1Q8N5M9 183 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 Q8N7P7 452 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 PHYHIPQ92561 330 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 CEP19Q96LK0 163 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
NUP50-219ENST00000497960 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
NUP50-219ENST00000497960 TRDV1A0A1B0GX56 115 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 RNASEK-C17orf49H0YIS7 233 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 ALDOBP05062 364 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 TMEM225BP0DP42 221 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 GALP22466 123 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 ZNF93P35789 620 aaPredicted RBP12.57□□□□□ -0.4
NUP50-219ENST00000497960 CEBPDP49716 269 aaPredicted RBP12.57□□□□□ -0.4
NUP50-219ENST00000497960 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 RPL31P62899 125 aaKnown RBP12.57□□□□□ -0.4
NUP50-219ENST00000497960 TIMM50Q3ZCQ8 353 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 C22orf42Q6IC83 251 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 CD200R1LQ6Q8B3 271 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 RNF144BQ7Z419 303 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 PIP4P2Q8N4L2 257 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 OR5D13Q8NGL4 314 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 TNFAIP8L1Q8WVP5 186 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 CHCHD6Q9BRQ6 235 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 OR51E2Q9H255 320 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
NUP50-219ENST00000497960 C19orf12Q9NSK7 152 aa12.57□□□□□ -0.4
NUP50-219ENST00000497960 LOC100506127A0A0U1RQW1 187 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PRD5 423 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PRF3 423 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 A0A1W2PRM7 423 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 FAM181BA6NEQ2 426 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 NPFFO15130 113 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 ANGPTL7O43827 346 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 PAHP00439 452 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 CHRM2P08172 466 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 FBP1P09467 338 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 SRMP19623 302 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 GADD45AP24522 165 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 OR3A4PP47883 348 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 UBE2E1P51965 193 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 ZP1P60852 638 aa12.56□□□□□ -0.4
NUP50-219ENST00000497960 PRB3Q04118 309 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms