RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 PRORYQ9H606 182 aa1.42□□□□□ -2.18
VPS50-219ENST00000495039 ANKHQ9HCJ1 492 aa1.42□□□□□ -2.18
VPS50-219ENST00000495039 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 A0A0J9YYE9 177 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 A8MWP4 228 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 F5H5P2 479 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 PRMT5O14744 637 aaPredicted RBP1.41□□□□□ -2.18
VPS50-219ENST00000495039 SLC31A1O15431 190 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 GYG2O15488 501 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 CDS2O95674 445 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 TRBC1P01850 177 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 HLA-AP01891 365 aaKnown RBP1.41□□□□□ -2.18
VPS50-219ENST00000495039 SOD3P08294 240 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 CTSGP08311 255 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 CRABP2P29373 138 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 IL12BP29460 328 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 LGALS7P47929 136 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 XKP51811 444 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 CYP4Z1Q86W10 505 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 ZNF738Q8NE65 137 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 OR4A15Q8NGL6 344 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 OR51Q1Q8NH59 317 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 DOK4Q8TEW6 326 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 ANAPC13Q9BS18 74 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 VCX3AQ9NNX9 186 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 SDHAF2Q9NX18 166 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 NAGKQ9UJ70 344 aa1.41□□□□□ -2.18
VPS50-219ENST00000495039 C14orf166Q9Y224 244 aaKnown RBP1.41□□□□□ -2.18
VPS50-219ENST00000495039 ZNF443Q9Y2A4 671 aaPredicted RBP1.41□□□□□ -2.18
VPS50-219ENST00000495039 LTBP2Q14767 1821 aa1.4□□□□□ -2.18
VPS50-219ENST00000495039 K7EN84 100 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 RFXANKO14593 260 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 KDELR3O43731 214 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 CRYGCP07315 174 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 GZMAP12544 262 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 GTF2F2P13984 249 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 PRTN3P24158 256 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 FUSP35637 526 aaKnown RBP eCLIP1.4□□□□□ -2.19
VPS50-219ENST00000495039 DEKP35659 375 aaKnown RBP1.4□□□□□ -2.19
VPS50-219ENST00000495039 ZNF83P51522 516 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 Q499Y3 187 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 NKAIN1Q4KMZ8 207 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 C16orf87Q6PH81 154 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 CYHR1Q6ZMK1 362 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 DPPA2Q7Z7J5 298 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 OR6K2Q8NGY2 324 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 BLNKQ8WV28 456 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 TWIST2Q8WVJ9 160 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 PYURFQ96I23 114 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 ADTRPQ96IZ2 230 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 BCL7BQ9BQE9 202 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 MAP1LC3CQ9BXW4 147 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 ULBP1Q9BZM6 244 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 TM6SF2Q9BZW4 377 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 PLEKHA1Q9HB21 404 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 ACOT13Q9NPJ3 140 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 DIABLOQ9NR28 239 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 DNAJC27Q9NZQ0 273 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 VAPAQ9P0L0 249 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 SLC22A14Q9Y267 594 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 NRCAMQ92823 1304 aa1.4□□□□□ -2.19
VPS50-219ENST00000495039 DYSFO75923 2080 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 NUP205Q92621 2012 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 A0A1W2PNM2 257 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 H3BMM0 161 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 ENSAO43768 121 aaKnown RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 ZNF73O43830 326 aaPredicted RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 OTCP00480 354 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 CBR1P16152 277 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 DHRS2Q13268 280 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 BCL2A1Q16548 175 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 CEACAM16Q2WEN9 425 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 ACTBL2Q562R1 376 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 C6orf183Q5T699 404 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 TMEM215Q68D42 235 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 GLYATQ6IB77 296 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 ERICH5Q6P6B1 374 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 LYZL2Q7Z4W2 148 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 GALNT10Q86SR1 603 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 GAPTQ8N292 157 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 ASCC1Q8N9N2 400 aaKnown RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 OR13C9Q8NGT0 318 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 CLHC1Q8NHS4 586 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 UBE2WQ96B02 151 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 FMC1Q96HJ9 113 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 ZNF436Q9C0F3 470 aaPredicted RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 NXF2Q9GZY0 626 aaKnown RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 SYT4Q9H2B2 425 aa1.39□□□□□ -2.19
VPS50-219ENST00000495039 SAMHD1Q9Y3Z3 626 aaKnown RBP1.39□□□□□ -2.19
VPS50-219ENST00000495039 A0A1B0GU33 70 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 GSTTP1A0A1W2PQM5 241 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 RBFOX3A6NFN3 312 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 E7EWF7 191 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 H0YC42 278 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 CD8AP01732 235 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 CECR9P0C854 216 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 PSMD8P48556 350 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 DSTNP60981 165 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 STX4Q12846 297 aa1.38□□□□□ -2.19
VPS50-219ENST00000495039 HNRNPA1L2Q32P51 320 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms