RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 MAP1LC3BQ9GZQ8 125 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 SLC45A2Q9UMX9 530 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 TRAPPC1Q9Y5R8 145 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 UBR3Q6ZT12 1888 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 TIPARPQ7Z3E1 657 aaKnown RBP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 DPF1Q92782 380 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 PHOX2AO14813 284 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 RPL13AP40429 203 aaKnown RBP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 ZBTB37Q5TC79 503 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 ZNF788Q6ZQV5 615 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 TRAPPC4Q9Y296 219 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 WSB1Q9Y6I7 421 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 KIAA1551Q9HCM1 1747 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 SMRP1Q8NCR6 262 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 UCN2Q96RP3 112 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 POMT1Q9Y6A1 747 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 A0A1W2PQD3 144 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 C21orf140B9A014 251 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 ACTL6AO96019 429 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 HIKESHIQ53FT3 197 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 TSPO2Q5TGU0 170 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 OR2C3Q8N628 320 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
TRIM11-204ENST00000493030 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
TRIM11-204ENST00000493030 RAB5AP20339 215 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 GNG4P50150 75 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 OR8B3Q8NGG8 313 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.48
TRIM11-204ENST00000493030 OR8B2Q96RD0 313 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 COA4Q9NYJ1 87 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 PRR13Q9NZ81 148 aa12.02□□□□□ -0.48
TRIM11-204ENST00000493030 RANP62826 216 aaKnown RBP12.02□□□□□ -0.49
TRIM11-204ENST00000493030 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 ZAR1Q86SH2 424 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 MAP6Q96JE9 813 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.49
TRIM11-204ENST00000493030 BCL3P20749 454 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 HNRNPA3P51991 378 aaKnown RBP12.02□□□□□ -0.49
TRIM11-204ENST00000493030 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
TRIM11-204ENST00000493030 OR52L2PQ8NGH6 319 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 TMEM37Q8WXS4 190 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 NAT8BQ9UHF3 227 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 F2RL2O00254 374 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 OR1B1Q8NGR6 318 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 IFT22Q9H7X7 185 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 APC2O95996 2303 aa12.02□□□□□ -0.49
TRIM11-204ENST00000493030 SNCGO76070 127 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 CSF2RBP32927 897 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 CDC34P49427 236 aaPredicted RBP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 RNASEKQ6P5S7 137 aaKnown RBP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 LIAT1Q6ZQX7 453 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 MPC2O95563 127 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 HAND1O96004 215 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 TPPP2P59282 170 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 SPRED2Q7Z698 418 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 FRRS1LQ9P0K9 344 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 SOCS1O15524 211 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 ZNF737O75373 536 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 SP1P08047 785 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 MMP7P09237 267 aaPredicted RBP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 LGALS7P47929 136 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 POLR2GP62487 172 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 MRM1Q6IN84 353 aaKnown RBP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 ZNF66Q6ZN08 573 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 TBC1D26Q86UD7 250 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 OR10G4Q8NGN3 311 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 OR10G9Q8NGN4 311 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 OR10G7Q8NGN6 311 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 NTMQ9P121 344 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 FOXL2P58012 376 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 SFTPA2Q8IWL1 248 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 ABHD1Q96SE0 405 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 C5orf67F2Z3F1 127 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 ADAP1O75689 374 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 NQO2P16083 231 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 LSM6P62312 80 aaKnown RBP12.01□□□□□ -0.49
TRIM11-204ENST00000493030 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 ATG2BQ96BY7 2078 aa12.01□□□□□ -0.49
TRIM11-204ENST00000493030 SPAG17Q6Q759 2223 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 SCAND1P57086 179 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 DCAF10Q5QP82 559 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 R3HDM4Q96D70 268 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 WDFY2Q96P53 400 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 NXF2Q9GZY0 626 aaKnown RBP12□□□□□ -0.49
TRIM11-204ENST00000493030 TOLLIPQ9H0E2 274 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 A0A1W2PNV4 684 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 ZNF716A6NP11 495 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 BRS3P32247 399 aa12□□□□□ -0.49
TRIM11-204ENST00000493030 GALR1P47211 349 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms