RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 Q8IYB0 196 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 OR13G1Q8NGZ3 307 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 C14orf79Q96F83 325 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 CXXC4Q9H2H0 198 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PLEKHA6Q9Y2H5 1048 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 TRAV6A0A075B6T7 132 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 IGHV3-13P01766 116 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 ZMYND11Q15326 602 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 RNASE10Q5GAN6 216 aaKnown RBP10.8□□□□□ -0.68
NELFE-209ENST00000488426 NKAPLQ5M9Q1 402 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 C22orf34Q6ZV56 151 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 WDR86Q86TI4 376 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 GVQW1Q8N7I0 195 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 NUP37Q8NFH4 326 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 OR10AD1Q8NGE0 317 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 OR4D10Q8NGI6 311 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 EMG1Q92979 244 aaKnown RBP10.8□□□□□ -0.68
NELFE-209ENST00000488426 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
NELFE-209ENST00000488426 SLC2A8Q9NY64 477 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 ALG5Q9Y673 324 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 ZFHX3Q15911 3703 aa10.8□□□□□ -0.68
NELFE-209ENST00000488426 C7orf66A4D0T2 115 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 ATP6V1G2-DDX39BF2Z307 99 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 MLNRO43193 412 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 PEX14O75381 377 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 FCER2P06734 321 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 THBDP07204 575 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 ACAA1P09110 424 aaPredicted RBP10.79□□□□□ -0.68
NELFE-209ENST00000488426 FUT3P21217 361 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 SSTR2P30874 369 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
NELFE-209ENST00000488426 ZNF154Q13106 437 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 IL13RA2Q14627 380 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 HOGA1Q86XE5 327 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 SCCPDHQ8NBX0 429 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 OR51S1Q8NGJ8 323 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 TMEM171Q8WVE6 324 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 FBXW5Q969U6 566 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 NGBQ9NPG2 151 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 FZR1Q9UM11 496 aa10.79□□□□□ -0.68
NELFE-209ENST00000488426 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
NELFE-209ENST00000488426 IGLV3-9A0A075B6K5 115 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 FAM172BPA6NC97 362 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 HMX3A6NHT5 357 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 DISC1C4P0D8 188 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 M0QYG6 137 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 PRAF2O60831 178 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 AMY2AP04746 511 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 DTYMKP23919 212 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 MECP2P51608 486 aaKnown RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 RAB25P57735 213 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 DAZAP2Q15038 168 aaPredicted RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 CARTPTQ16568 116 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 Q6ZR03 302 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 WFDC8Q8IUA0 241 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 OR4S1Q8NGB4 309 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SNAPC3Q92966 411 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 PRRT1Q99946 306 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 DHRS9Q9BPW9 319 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SLC25A21Q9BQT8 299 aaPredicted RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 TINAGL1Q9GZM7 467 aaPredicted RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 CHST6Q9GZX3 395 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 TLNRD1Q9H1K6 362 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 LIME1Q9H400 295 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SCP2D1Q9UJQ7 156 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 EDARQ9UNE0 448 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 F8VVB4 439 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 F8VWA3 439 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 H0YL77 283 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 OR7C1O76099 320 aaPredicted RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 ZNF735P0CB33 412 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 TAS2R46P59540 309 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SELENOVP59797 346 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 MRPS15P82914 257 aaKnown RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 MSMPQ1L6U9 139 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 VAX1Q5SQQ9 334 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 OR52W1Q6IF63 320 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SLC51BQ86UW2 128 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 FAM58AQ8N1B3 248 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 BPIFB2Q8N4F0 458 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 OR4K15Q8NH41 348 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 LINC01560Q8TB33 94 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 LRRC46Q96FV0 321 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 RADILQ96JH8 1075 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SULT4A1Q9BR01 284 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 GINS4Q9BRT9 223 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 FAAP24Q9BTP7 215 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 SPACA1Q9HBV2 294 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
NELFE-209ENST00000488426 AK3Q9UIJ7 227 aa10.78□□□□□ -0.68
NELFE-209ENST00000488426 ARPC1BO15143 372 aaKnown RBP10.77□□□□□ -0.69
NELFE-209ENST00000488426 NOS1APO75052 506 aaPredicted RBP10.77□□□□□ -0.69
NELFE-209ENST00000488426 RHBDL1O75783 438 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 PGA5P0DJD9 388 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 PRKACAP17612 351 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 AMY2BP19961 511 aa10.77□□□□□ -0.69
NELFE-209ENST00000488426 HRH1P35367 487 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms