RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 GDPD3Q7L5L3 318 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 OSR2Q8N2R0 312 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 OR4M1Q8NGD0 313 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 OR4D6Q8NGJ1 314 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 SNX22Q96L94 193 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 FAM234AQ9H0X4 552 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 ZNF696Q9H7X3 374 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 C19orf12Q9NSK7 152 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
HPS4-214ENST00000485842 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 TRDV1A0A1B0GX56 115 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 A0A1W2PP11 408 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 MEX3AA1L020 520 aaKnown RBP9.77□□□□□ -0.85
HPS4-214ENST00000485842 DEGS1O15121 323 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 PSPNO60542 156 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 TOX4O94842 621 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 RPL31P62899 125 aaKnown RBP9.77□□□□□ -0.85
HPS4-214ENST00000485842 GRK1Q15835 563 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 SYT6Q5T7P8 510 aaPredicted RBP9.77□□□□□ -0.85
HPS4-214ENST00000485842 C22orf42Q6IC83 251 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 C17orf107Q6ZR85 190 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 CDH26Q8IXH8 852 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 CMTM4Q8IZR5 234 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 OR8H2Q8N162 312 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 LY6G5BQ8NDX9 201 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 OR4S1Q8NGB4 309 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 C8orf46Q8TAG6 207 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 NANPQ8TBE9 248 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 WDFY2Q96P53 400 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 PPA2Q9H2U2 334 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 PLGRKTQ9HBL7 147 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 ING3Q9NXR8 418 aa9.77□□□□□ -0.85
HPS4-214ENST00000485842 AK6Q9Y3D8 172 aaKnown RBP9.77□□□□□ -0.85
HPS4-214ENST00000485842 NF1P21359 2839 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 NIPBLQ6KC79 2804 aaeCLIP9.76□□□□□ -0.85
HPS4-214ENST00000485842 HSPB6O14558 160 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 ZNF780AO75290 641 aaPredicted RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 CRTAPO75718 401 aaPredicted RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 GTF2F2P13984 249 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 EPHA1P21709 976 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 MYL9P24844 172 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 OR3A1P47881 315 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 RBM11P57052 281 aaKnown RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 GPR176Q14439 515 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 IL13RA2Q14627 380 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 PAN3Q58A45 887 aaKnown RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 Q6P435 159 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 CD200R1LQ6Q8B3 271 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 LYPD6Q86Y78 171 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 TPRX1Q8N7U7 411 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 OR51T1Q8NGJ9 327 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 OR5D13Q8NGL4 314 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 PPP1R35Q8TAP8 253 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 TBC1D15Q8TC07 691 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 FAM46BQ96A09 425 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 UPRTQ96BW1 309 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 FOXRED1Q96CU9 486 aaPredicted RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 TBX15Q96SF7 602 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 GFI1Q99684 422 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 KCNK15Q9H427 330 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 BANF2Q9H503 90 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 SEBOXQ9HB31 216 aaPredicted RBP9.76□□□□□ -0.85
HPS4-214ENST00000485842 SIRT7Q9NRC8 400 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 PCDHB16Q9NRJ7 776 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 STUB1Q9UNE7 303 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 ST3GAL6Q9Y274 331 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 KPTNQ9Y664 436 aa9.76□□□□□ -0.85
HPS4-214ENST00000485842 NAV3Q8IVL0 2385 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 SLC33A1O00400 549 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 GEMIN2O14893 280 aaKnown RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 OR7C1O76099 320 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 FSHBP01225 129 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 IGHV4-38-2P0DP08 117 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 MMP9P14780 707 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 MGMTP16455 207 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 CD36P16671 472 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 HTR2CP28335 458 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 PRB3Q04118 309 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 ZNF273Q14593 569 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 ATXN7L3Q14CW9 347 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 P2RY14Q15391 338 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 KLF17Q5JT82 389 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 C1orf100Q5SVJ3 147 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 METAP1DQ6UB28 335 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 VMO1Q7Z5L0 202 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 PDZD9Q8IXQ8 264 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 KIR3DL3Q8N743 410 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 CHST4Q8NCG5 386 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 TMEM104Q8NE00 496 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 Q8NFD4 153 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 OR6M1Q8NGM8 313 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 C22orf15Q8WYQ4 148 aa9.75□□□□□ -0.85
HPS4-214ENST00000485842 C1orf147Q96MC9 270 aaPredicted RBP9.75□□□□□ -0.85
HPS4-214ENST00000485842 CHCHD6Q9BRQ6 235 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms