RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CMYA5Q8N3K9 4069 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 TMEM269A0A1B0GVZ9 245 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 A6NDX4 124 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 FAM90A8PA6NJQ4 464 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ACOD1A6NK06 481 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 J3QT63 122 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 SELENOFO60613 162 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 NXPH2O95156 264 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 RBP4P02753 201 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 HMGN1P05114 100 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 DUSP1P28562 367 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 VDAC2P45880 294 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-207ENST00000483407 HAAOP46952 286 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 MNAT1P51948 309 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 OR12D2P58182 307 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 DYNC1I2Q13409 638 aaKnown RBP4.72□□□□□ -1.65
CSDE1-207ENST00000483407 GK3PQ14409 553 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ZNF273Q14593 569 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 SSX2Q16385 188 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 BAK1Q16611 211 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 FAM98BQ52LJ0 330 aaKnown RBP4.72□□□□□ -1.65
CSDE1-207ENST00000483407 SLC35D3Q5M8T2 416 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ZNF684Q5T5D7 378 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 MZT2BQ6NZ67 158 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 PLBD1Q6P4A8 553 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 KCTD18Q6PI47 426 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-207ENST00000483407 DEGS2Q6QHC5 323 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 KRT74Q7RTS7 529 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 LHFPL4Q7Z7J7 247 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 TMEM219Q86XT9 240 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 DEFB107AQ8IZN7 70 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 C11orf42Q8N5U0 333 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 IQCF1Q8N6M8 205 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 CD177Q8N6Q3 437 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 OR10G2Q8NGC3 310 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 CAPSLQ8WWF8 208 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 AKR1E2Q96JD6 320 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 OR5M11Q96RB7 305 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 NIPSNAP1Q9BPW8 284 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 MROQ9BYG7 248 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ACTR3BQ9P1U1 418 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 ENPP5Q9UJA9 477 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 LAMP5Q9UJQ1 280 aa4.72□□□□□ -1.65
CSDE1-207ENST00000483407 A0A087X0M5 115 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 A0A1B0GX30 115 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ARRDC5A6NEK1 342 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 C17orf98A8MV24 154 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ODF3BA8MYP8 253 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 SYNGR1O43759 233 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 NOS1APO75052 506 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ZNF254O75437 659 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DHRS3O75911 302 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DUS4LO95620 317 aaKnown RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 CLIC3O95833 236 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 NRASP01111 189 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 NPSP0C0P6 89 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 PGA5P0DJD9 388 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ZNF728P0DKX0 622 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 PIPP12273 146 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 IGLL1P15814 213 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ALOX5APP20292 161 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ATP6V1B2P21281 511 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 AZGP1P25311 298 aaKnown RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 PCP4P48539 62 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 RAB13P51153 203 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DYNLT3P51808 116 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 RIDAP52758 137 aaKnown RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 EDDM3BP56851 147 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 SLC35A2P78381 396 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 CBX1P83916 185 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DGCR2P98153 550 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 SLC34A1Q06495 639 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 FOXE3Q13461 319 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 IL18R1Q13478 541 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ZNF829Q3KNS6 432 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DMRTC1Q5HYR2 192 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DEFB121Q5J5C9 76 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 CLVS2Q5SYC1 327 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 MINOS1Q5TGZ0 78 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ZNF626Q68DY1 528 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 LCN8Q6JVE9 175 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 CCBE1Q6UXH8 406 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ZBTB49Q6ZSB9 765 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 GDPD3Q7L5L3 318 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 TRPM8Q7Z2W7 1104 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 PIGWQ7Z7B1 504 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 CENPVQ7Z7K6 275 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 DHFR2Q86XF0 187 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ASCC1Q8N9N2 400 aaKnown RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 WFDC9Q8NEX5 89 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 OR5AU1Q8NGC0 362 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 OR11H6Q8NGC7 330 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 NDNFQ8TB73 568 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 OR51E1Q8TCB6 317 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 GIPC3Q8TF64 312 aa4.71□□□□□ -1.66
CSDE1-207ENST00000483407 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-207ENST00000483407 ASB17Q8WXJ9 295 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms