RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 JAGN1Q8N5M9 183 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 KIR3DL3Q8N743 410 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 LY6G5BQ8NDX9 201 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 TMEM185AQ8NFB2 350 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 TBC1D15Q8TC07 691 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 FAM192AQ9GZU8 254 aa15.36■□□□□ 0.05
CCDC171-206ENST00000474193 HOXA3O43365 443 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-206ENST00000474193 SYNGR1O43759 233 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 PSG2P11465 335 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 GLT8D1Q68CQ7 371 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 ASPHD2Q6ICH7 369 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 CD200R1LQ6Q8B3 271 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 FIP1L1Q6UN15 594 aaKnown RBP15.35■□□□□ 0.05
CCDC171-206ENST00000474193 C1orf122Q6ZSJ8 110 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 POC1AQ8NBT0 407 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 OR5D18Q8NGL1 313 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 TNFAIP8L1Q8WVP5 186 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 FOXRED1Q96CU9 486 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-206ENST00000474193 CEP19Q96LK0 163 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 GAFA1Q96PS6 74 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 PRDM13Q9H4Q3 707 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 ELL3Q9HB65 397 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-206ENST00000474193 SCOCQ9UIL1 159 aa15.35■□□□□ 0.05
CCDC171-206ENST00000474193 A0A1B0GW55 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 PDCD5O14737 125 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 SPRY1O43609 319 aaPredicted RBP15.34■□□□□ 0.05
CCDC171-206ENST00000474193 NOS1APO75052 506 aaPredicted RBP15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L2P0CJ85 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L3P0CJ86 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L4P0CJ87 422 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L5P0CJ88 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L6P0CJ89 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L7P0CJ90 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 PGA5P0DJD9 388 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 RANBP1P43487 201 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 PSMD7P51665 324 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 RUSC1-AS1Q66K80 236 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 C22orf42Q6IC83 251 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4L9Q6RFH8 374 aaPredicted RBP15.34■□□□□ 0.05
CCDC171-206ENST00000474193 Q6YL49 198 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 ACP7Q6ZNF0 438 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 SAXO1Q8IYX7 474 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 TMEM86BQ8N661 226 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 ZSCAN4Q8NAM6 433 aaPredicted RBP15.34■□□□□ 0.05
CCDC171-206ENST00000474193 C8orf46Q8TAG6 207 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 SSMEM1Q8WWF3 244 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 SLAMF9Q96A28 289 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 CHCHD6Q9BRQ6 235 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 DUX4Q9UBX2 424 aa15.34■□□□□ 0.05
CCDC171-206ENST00000474193 TRBV23-1A0A0A0MS06 115 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 LOC100506127A0A0U1RQW1 187 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 hCG_1809904A0A1W2PP81 198 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 A0A1W2PPE2 198 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 A0A1W2PR64 198 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 A0A1W2PRV1 198 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 RFPL4AA6NLU0 287 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 RFPL4AL1F8VTS6 287 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 AMY2BP19961 511 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 FGF9P31371 208 aaPredicted RBP15.33■□□□□ 0.04
CCDC171-206ENST00000474193 DGUOKQ16854 277 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 METAP1DQ6UB28 335 aaPredicted RBP15.33■□□□□ 0.04
CCDC171-206ENST00000474193 ZNF561Q8N587 486 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 ZNRF1Q8ND25 227 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 SDSLQ96GA7 329 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 OR51E2Q9H255 320 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 RHOFQ9HBH0 211 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 PCDHB16Q9NRJ7 776 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 TNFRSF19Q9NS68 423 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 TXNL4BQ9NX01 149 aaKnown RBP15.33■□□□□ 0.04
CCDC171-206ENST00000474193 ING4Q9UNL4 249 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 SOX21Q9Y651 276 aaPredicted RBP15.33■□□□□ 0.04
CCDC171-206ENST00000474193 POMT1Q9Y6A1 747 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 FBN3Q75N90 2809 aa15.33■□□□□ 0.04
CCDC171-206ENST00000474193 IGKV1D-17A0A075B6S4 117 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 TRAV1-2A0A0B4J238 106 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 MDFIC2A0A1B0GVS7 189 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 POM121CA8CG34 1229 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 M0R1W7 72 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 FCN3O75636 299 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 GADD45AP24522 165 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 PRDX2P32119 198 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 PTGFRP43088 359 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 RSU1Q15404 277 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 NCR3LG1Q68D85 454 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 GDPGP1Q6ZNW5 385 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 GPR141Q7Z602 305 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 PDZD9Q8IXQ8 264 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 FAM185AQ8N0U4 392 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 FGFRL1Q8N441 504 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 OR5D13Q8NGL4 314 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 SGMS2Q8NHU3 365 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 C1orf147Q96MC9 270 aaPredicted RBP15.32■□□□□ 0.04
CCDC171-206ENST00000474193 ZNF488Q96MN9 340 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 KCTD7Q96MP8 289 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 NRIP2Q9BQI9 281 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 UQCC2Q9BRT2 126 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 METTL9Q9H1A3 318 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 PPIL3Q9H2H8 161 aaKnown RBP15.32■□□□□ 0.04
CCDC171-206ENST00000474193 DPAGT1Q9H3H5 408 aa15.32■□□□□ 0.04
CCDC171-206ENST00000474193 METTL8Q9H825 291 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms