RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 DHRS7CA6NNS2 312 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 J3QLW9 94 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 M0R129 80 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 PLPP2O43688 288 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 CD5LO43866 347 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ENTPD6O75354 484 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 FOXH1O75593 365 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 DHRS3O75911 302 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 LY6HO94772 140 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 NRASP01111 189 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 TGFAP01135 160 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 DBTP11182 482 aaKnown RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 RPS2P15880 293 aaKnown RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF19P17023 458 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 DCKP27707 260 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 OTX1P32242 354 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 RIPPLY3P57055 190 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 TAS2R43P59537 309 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 BTG1P62324 171 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ELF3P78545 371 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF92Q03936 586 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 MICBQ29980 383 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM249Q2WGJ8 235 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 SNAI3Q3KNW1 292 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 CHRFAM7AQ494W8 412 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 AADACL4Q5VUY2 407 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 PLCXD3Q63HM9 321 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF573Q86YE8 665 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 POC5Q8NA72 575 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 OR4M2Q8NGB6 313 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 TSEN15Q8WW01 171 aaKnown RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 C10orf35Q96D05 121 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 RNF170Q96K19 258 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 S100A13Q99584 98 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 GFI1Q99684 422 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 HRH4Q9H3N8 390 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 RNPEPL1Q9HAU8 725 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ADGRL4Q9HBW9 690 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ERVK-18Q9QC07 812 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 NUFIP1Q9UHK0 495 aaKnown RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ERGIC3Q9Y282 383 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 PIGLQ9Y2B2 252 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 TPRKBQ9Y3C4 175 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 RAI1Q7Z5J4 1906 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-208ENST00000469585 MYO9AB2RTY4 2548 aa5.2□□□□□ -1.58
PTCD3-208ENST00000469585 ITPR2Q14571 2701 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PLCE1Q9P212 2302 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 USF3Q68DE3 2245 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PPIAL4EA0A075B759 164 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 A0A1W2PP11 408 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 MAGEA13PA6NCF6 341 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CCDC182A6NF36 153 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ANKRD65E5RJM6 399 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PPIAL4DF5H284 164 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 F5H5P2 479 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 H0YJX3 145 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CTDSP2O14595 271 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CASQ2O14958 399 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 LMX1BO60663 402 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PPIAL4FP0DN26 164 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PRKACBP22694 351 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 EEF1B2P24534 225 aaKnown RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 EPHA2P29317 976 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 POLR2IP36954 125 aaKnown RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CD200P41217 278 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 NPY4RP50391 375 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 GNB2P62879 340 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PPP3R1P63098 170 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 GNG3P63215 75 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 HNRNPA0Q13151 305 aaKnown RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PRDX4Q13162 271 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ODF4Q2M2E3 257 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF181Q2M3W8 571 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 SMIM21Q3B7S5 101 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 KRTAP27-1Q3LI81 207 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM155Q4W5P6 130 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CLVS2Q5SYC1 327 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 AVPI1Q5T686 147 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OGFRL1Q5TC84 451 aaPredicted RBP5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF691Q5VV52 312 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 SLC36A1Q7Z2H8 476 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 CCDC190Q86UF4 302 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ODF3L1Q8IXM7 274 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ENTHD1Q8IYW4 607 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 SYS1Q8N2H4 156 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OR8B12Q8NGG6 310 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OR5D14Q8NGL3 314 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OR13C3Q8NGS6 347 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OR5AK2Q8NH90 309 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 OR51E1Q8TCB6 317 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 PP6455Q8WZ26 134 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 BORCS8Q96FH0 119 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM80Q96HE8 168 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF665Q9H7R5 613 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 GPR84Q9NQS5 396 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 UFSP2Q9NUQ7 469 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 C1orf123Q9NWV4 160 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 TREM2Q9NZC2 230 aa5.19□□□□□ -1.58
PTCD3-208ENST00000469585 HHLA2Q9UM44 414 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms