RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TLN1Q9Y490 2541 aaKnown RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 FGF2P09038 288 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 GLI4P10075 376 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 BCL3P20749 454 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 CEACAM8P31997 349 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 MAP1BP46821 2468 aaKnown RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 NPBWR2P48146 333 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 GMFBP60983 142 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 ERVS71-1P61550 626 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 VAX1Q5SQQ9 334 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 FBXW12Q6X9E4 464 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 BEND4Q6ZU67 534 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 BHLHA15Q7RTS1 189 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 OR5A2Q8NGI9 324 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 OR5P3Q8WZ94 311 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 MRGPRFQ96AM1 343 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 HDHD3Q9BSH5 251 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 FAAP24Q9BTP7 215 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 DNTTIP1Q9H147 329 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 ZNF701Q9NV72 531 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-213ENST00000462730 AK3Q9UIJ7 227 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 HSF4Q9ULV5 492 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
HDAC6-213ENST00000462730 OR2AT4A6NND4 320 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 OR4E1P0C645 316 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 P2RY6Q15077 328 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 C11orf88Q6PI97 169 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 SAXO1Q8IYX7 474 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 ZDHHC22Q8N966 263 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 FAM122AQ96E09 287 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 SULT4A1Q9BR01 284 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 OR2J1Q9GZK6 312 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 SH3BGRL2Q9UJC5 107 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 RPA2P15927 270 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 CA6P23280 308 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 TAS2R46P59540 309 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 FLI1Q01543 452 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF660Q6AZW8 331 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-213ENST00000462730 C17orf78Q8N4C9 275 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 BVESQ8NE79 360 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 OR10AD1Q8NGE0 317 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 OR1S1Q8NH92 325 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 SLC25A40Q8TBP6 338 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 MYOZ1Q9NP98 299 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF835Q9Y2P0 537 aa12.39□□□□□ -0.43
HDAC6-213ENST00000462730 OR5B21A6NL26 309 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 LGALS8O00214 317 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 PDCD6O75340 191 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 IGKV3-15P01624 115 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 PDCD1Q15116 288 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 BRICD5Q6PL45 260 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF474Q6S9Z5 364 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-213ENST00000462730 PDZD9Q8IXQ8 264 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 MKXQ8IYA7 352 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 OR1J1Q8NGS3 322 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 DYRK2Q92630 601 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 DMRTA2Q96SC8 542 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 CMSS1Q9BQ75 279 aaKnown RBP12.38□□□□□ -0.43
HDAC6-213ENST00000462730 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
HDAC6-213ENST00000462730 ZGRF1Q86YA3 2104 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 TEX46H3BTG2 121 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 ABCD4O14678 606 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 MSTNO14793 375 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 BMP5P22003 454 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 UCP2P55851 309 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 GNG3P63215 75 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 SORDQ00796 357 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 KLRB1Q12918 225 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 CHRFAM7AQ494W8 412 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-213ENST00000462730 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 STPG2Q8N412 459 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 Q8NFD4 153 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 MS4A7Q9GZW8 240 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-213ENST00000462730 MFFQ9GZY8 342 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 OBP2BQ9NPH6 170 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
HDAC6-213ENST00000462730 IGKV1D-8A0A087WSZ0 117 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 RFPL4AA6NLU0 287 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 RFPL4AL1F8VTS6 287 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 H3BUI4 141 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 SDCBPO00560 298 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-213ENST00000462730 SYNGR1O43759 233 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-213ENST00000462730 SPDEFO95238 335 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 CECR9P0C854 216 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 PLA2G5P39877 138 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 S100A12P80511 92 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 OR13G1Q8NGZ3 307 aa12.37□□□□□ -0.43
HDAC6-213ENST00000462730 TERB2Q8NHR7 220 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms