RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF552Q9H707 407 aaPredicted RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 TMEM9BQ9NQ34 198 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 NAT8Q9UHE5 227 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 RNF115Q9Y4L5 304 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 SCN2AQ99250 2005 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 LOC101059948A0A1B0GTJ6 334 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 IGSF23A1L1A6 192 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 M0QZ24 198 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 TRAPPC6AO75865 159 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 TYMSP04818 313 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 MTCP1P56278 107 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 PIGPP57054 158 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 TMEM187Q14656 261 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 PRICKLE4Q2TBC4 344 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 Q6ZWC4 215 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 OR4N2Q8NGD1 307 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 OR2T10Q8NGZ9 312 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 ADAT3Q96EY9 351 aaPredicted RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 P2RX4Q99571 388 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 GABRG3Q99928 467 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 LMF2Q9BU23 707 aaKnown RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 TBL1XR1Q9BZK7 514 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 LRIT1Q9P2V4 623 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 PRSS50Q9UI38 385 aa7.52□□□□□ -1.21
LSM5-208ENST00000450169 MRPS28Q9Y2Q9 187 aaKnown RBP7.52□□□□□ -1.21
LSM5-208ENST00000450169 A0A1B0GUS0 222 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 LINC01553A4QN01 128 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 ZNF878C9JN71 531 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 NUPR1O60356 82 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 SLC16A7O60669 478 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 HPNP05981 417 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CT62P0C5K7 136 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 PNMTP11086 282 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 UBE2G2P60604 165 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 MLF2Q15773 248 aaPredicted RBP7.51□□□□□ -1.21
LSM5-208ENST00000450169 ZNF141Q15928 474 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 BSXQ3C1V8 233 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 DEFB134Q4QY38 66 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CYP2G1PQ6ZSU1 146 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CENPVQ7Z7K6 275 aaPredicted RBP7.51□□□□□ -1.21
LSM5-208ENST00000450169 ZNF738Q8NE65 137 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 OR5D14Q8NGL3 314 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 OR5C1Q8NGR4 320 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CMTM2Q8TAZ6 248 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 ADAMTS18Q8TE60 1221 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CYB5D2Q8WUJ1 264 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 DAZLQ92904 295 aaKnown RBP7.51□□□□□ -1.21
LSM5-208ENST00000450169 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 PGAM5Q96HS1 289 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 SPACA5Q96QH8 159 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 RASL10BQ96S79 203 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 SMIM7Q9BQ49 75 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 PLK3Q9H4B4 646 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 ZNF665Q9H7R5 613 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 COX11Q9Y6N1 276 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 CDH23Q9H251 3354 aa7.51□□□□□ -1.21
LSM5-208ENST00000450169 IGHV2-70DA0A0C4DH43 119 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 A0A1W2PP11 408 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 HIDE1A8MVS5 230 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 FGF17O60258 216 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 SYNGR4O95473 234 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OPN1LWP04000 364 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 CT45A8P0DMV1 189 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 CT45A9P0DMV2 189 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 TCN2P20062 427 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 RPL19P84098 196 aaKnown RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 RUNX2Q13950 521 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 ARL6IP1Q15041 203 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 CT45A2Q5DJT8 189 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 ZNF787Q6DD87 383 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 RNF144BQ7Z419 303 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 ZNF321PQ8N8H1 164 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR5T1Q8NG75 326 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR52R1Q8NGF1 315 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 VN1R17PQ8TDU5 208 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 C18orf12Q96KH6 178 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 C1orf147Q96MC9 270 aaPredicted RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR51I2Q9H344 312 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 NAA60Q9H7X0 242 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 PLEKHF2Q9H8W4 249 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 TUBG2Q9NRH3 451 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 TMEM74BQ9NUR3 256 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 ZNF701Q9NV72 531 aaPredicted RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 DAPP1Q9UN19 280 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 LAMTOR2Q9Y2Q5 125 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 IGLV1-36A0A0B4J1U3 117 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 A0A1W2PQ45 241 aaPredicted RBP7.5□□□□□ -1.21
LSM5-208ENST00000450169 A0A1W2PQY0 241 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 PRSS37A4D1T9 235 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 CLEC18AA5D8T8 446 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 GPR89AB7ZAQ6 455 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 B3GALT2O43825 422 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 GPR89BP0CG08 455 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 GCH1P30793 250 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 HOXC12P31275 282 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 CDKN1AP38936 164 aa7.5□□□□□ -1.21
LSM5-208ENST00000450169 OR3A4PP47883 348 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms