RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 FAM90A5PA8MXJ8 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A23PA8MXZ1 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 LGALS8O00214 317 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 SH2D1BO14796 132 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PPIHO43447 177 aaKnown RBP12.26□□□□□ -0.45
TNF-208ENST00000449264 SSX4O60224 188 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PDCD6O75340 191 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 GYPAP02724 150 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A15PP0C7V4 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A13PP0C7W8 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A14PP0C7W9 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 FAM90A24PP0C7X0 464 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 CHATP28329 748 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 ETV6P41212 452 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 MNDAP41218 407 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PTH2RP49190 550 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 ATP5J2P56134 94 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 TMEM50BP56557 158 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 BTG1P62324 171 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 MRPS11P82912 194 aaKnown RBP12.26□□□□□ -0.45
TNF-208ENST00000449264 ZMYND11Q15326 602 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 TEX36Q5VZQ5 186 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 Q6P435 159 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 PEG10Q86TG7 708 aaKnown RBP12.26□□□□□ -0.45
TNF-208ENST00000449264 ZNF525Q8N782 197 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 NEK7Q8TDX7 302 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 DYRK2Q92630 601 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 CHODLQ9H9P2 273 aa12.26□□□□□ -0.45
TNF-208ENST00000449264 TRAV38-1A0A0B4J264 116 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 MUC1P15941 1255 aaPredicted RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 HIST1H1DP16402 221 aaKnown RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 FUT3P21217 361 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 NR4A2P43354 598 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ZNF45Q02386 682 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ZNF79Q15937 498 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 OLFML2AQ68BL7 652 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 STUMQ69YW2 141 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 PYHIN1Q6K0P9 492 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 CD177Q8N6Q3 437 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ASCC1Q8N9N2 400 aaKnown RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 SUMF2Q8NBJ7 301 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ANGPTL6Q8NI99 470 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ABHD1Q96SE0 405 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 NUDT16L1Q9BRJ7 211 aaKnown RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 PECRQ9BY49 303 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 WDR12Q9GZL7 423 aaKnown RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 METRNQ9UJH8 293 aa12.25□□□□□ -0.45
TNF-208ENST00000449264 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
TNF-208ENST00000449264 TRAV24A0A0B4J272 114 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 UBE2QL1A1L167 161 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 SLC33A1O00400 549 aaPredicted RBP12.24□□□□□ -0.45
TNF-208ENST00000449264 MFNGO00587 321 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 HLA-DQB1P01920 261 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 INHBBP09529 407 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 PRDX2P32119 198 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 COL10A1Q03692 680 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 ZNF846Q147U1 533 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 ZNF260Q3ZCT1 412 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 CDNFQ49AH0 187 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 PAN3Q58A45 887 aaKnown RBP12.24□□□□□ -0.45
TNF-208ENST00000449264 BPIFB2Q8N4F0 458 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 TIMD4Q96H15 378 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 SULT4A1Q9BR01 284 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 FAAP24Q9BTP7 215 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 DPCDQ9BVM2 203 aaPredicted RBP12.24□□□□□ -0.45
TNF-208ENST00000449264 CHST6Q9GZX3 395 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 AUNIPQ9H7T9 357 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 SPACA1Q9HBV2 294 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 ZNF701Q9NV72 531 aaPredicted RBP12.24□□□□□ -0.45
TNF-208ENST00000449264 RCC2Q9P258 522 aaKnown RBP12.24□□□□□ -0.45
TNF-208ENST00000449264 ZNF222Q9UK12 451 aa12.24□□□□□ -0.45
TNF-208ENST00000449264 A0A1B0GW55 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 NKX6-3A6NJ46 265 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 J3QRK9 145 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L2P0CJ85 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L3P0CJ86 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L4P0CJ87 422 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L5P0CJ88 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L6P0CJ89 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L7P0CJ90 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 PITPNAQ00169 270 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4L9Q6RFH8 374 aaPredicted RBP12.23□□□□□ -0.45
TNF-208ENST00000449264 NUDCD2Q8WVJ2 157 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 POM121Q96HA1 1249 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 CCL13Q99616 98 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 SOSTQ9BQB4 213 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 DUX4Q9UBX2 424 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 ITPR2Q14571 2701 aa12.23□□□□□ -0.45
TNF-208ENST00000449264 MEIS3P1A6NDR6 274 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 MCRIP1C9JLW8 97 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 IGHV2-70P01814 119 aa12.22□□□□□ -0.45
TNF-208ENST00000449264 SELLP14151 372 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms