RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 ATG2AQ2TAZ0 1938 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 DIDO1Q9BTC0 2240 aaKnown RBP12.14□□□□□ -0.47
VPS52-212ENST00000445902 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 HSPA12AO43301 675 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 TNFP01375 233 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 NTSR1P30989 418 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 GFERP55789 205 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 OR4D5Q8NGN0 318 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 MOB1AQ9H8S9 216 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 UNC13CQ8NB66 2214 aa12.14□□□□□ -0.47
VPS52-212ENST00000445902 IGHV3-20A0A0C4DH32 117 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 FAM221BA6H8Z2 402 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 H3BP45 60 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
VPS52-212ENST00000445902 HLA-HP01893 362 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 CTSEP14091 401 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 MYOGP15173 224 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 ZNF25P17030 456 aaPredicted RBP12.13□□□□□ -0.47
VPS52-212ENST00000445902 NKX2-1P43699 371 aaPredicted RBP12.13□□□□□ -0.47
VPS52-212ENST00000445902 LBX1P52954 281 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 FOXF1Q12946 379 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 SMAD4Q13485 552 aaKnown RBP12.13□□□□□ -0.47
VPS52-212ENST00000445902 SLC10A1Q14973 349 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 NSDHLQ15738 373 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 FAM90A2PQ658T7 463 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 NKX2-4Q9H2Z4 354 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 ZNF665Q9H7R5 613 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 PIGLQ9Y2B2 252 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 XKRY2A2RUG3 117 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 DVL1O14640 695 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 PITX3O75364 302 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 VAMP2P63027 116 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 OR1P1Q8NH06 330 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 NOL4LQ96MY1 436 aaPredicted RBP12.13□□□□□ -0.47
VPS52-212ENST00000445902 GPR173Q9NS66 373 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 DOCK11Q5JSL3 2073 aa12.13□□□□□ -0.47
VPS52-212ENST00000445902 A0A1B0GU03 582 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 BLACEA4D250 179 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 CLN3Q13286 438 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 PNRC2Q9NPJ4 139 aaKnown RBP12.12□□□□□ -0.47
VPS52-212ENST00000445902 IGHV5-51A0A0C4DH38 117 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 A0A1W2PNR3 127 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 TNFRSF10CO14798 259 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 TMEM50AO95807 157 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 RAB4BP61018 213 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 ERVS71-1P61550 626 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
VPS52-212ENST00000445902 RAB24Q969Q5 203 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 DECR2Q9NUI1 292 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 KIR2DS5A0A0G2JLQ3 304 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 A0A0G2JNG1 304 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 LOC102723971A0A1B0GUV8 181 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 KIR2DS3K7RE56 304 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
VPS52-212ENST00000445902 PLA2G5P39877 138 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 H3F3AP84243 136 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 ZFP36L1Q07352 338 aaKnown RBP12.12□□□□□ -0.47
VPS52-212ENST00000445902 ZP4Q12836 540 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 PRSS8Q16651 343 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 RTL10Q7L3V2 364 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 THNSL2Q86YJ6 484 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 HIST1H2AAQ96QV6 131 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 TM2D1Q9BX74 207 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 LAMP3Q9UQV4 416 aa12.12□□□□□ -0.47
VPS52-212ENST00000445902 FER1L5A0AVI2 2057 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
VPS52-212ENST00000445902 MTCP1P56278 107 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 TLE4Q04727 773 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 C1orf189Q5VU69 101 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 SLC25A24Q6NUK1 477 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 OR10A7Q8NGE5 316 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 TMEM234Q8WY98 164 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 NAT6Q93015 286 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 RCC1LQ96I51 464 aaKnown RBP12.11□□□□□ -0.47
VPS52-212ENST00000445902 Q96M66 194 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 MRPL13Q9BYD1 178 aaKnown RBP12.11□□□□□ -0.47
VPS52-212ENST00000445902 PLEKHF2Q9H8W4 249 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ZNF160Q9HCG1 818 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 COPS7AQ9UBW8 275 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 A6NNC1 897 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ZNF814B7Z6K7 855 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ADAM20O43506 726 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 AADACP22760 399 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ARL6IP1Q15041 203 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 ADIRFQ15847 76 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 SPIN3Q5JUX0 258 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 THEM4Q5T1C6 240 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 UEVLDQ8IX04 471 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 D2HGDHQ8N465 521 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 NOXO1Q8NFA2 376 aa12.11□□□□□ -0.47
VPS52-212ENST00000445902 OR6X1Q8NH79 312 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms